|
Name : H045_00205 (H045_00205) Accession : YP_007395613.1 Strain : Pseudomonas poae RE*1-1-14 Genome accession: NC_020209 Putative virulence/resistance : Virulence Product : putative type III secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 46123 - 47220 bp Length : 1098 bp Strand : + Note : COG4792 Type III secretory pathway, component EscU DNA sequence : ATGAGTGACTCAGGTGAAAAGAAACACCCGGCGTCAGCCAAGAAACTGCGTGATCAGCGCAAGAAAGGTCAGGTTTCCCA AAGTCAGGACATCGGTAAGTTACTGGCGCTGACCGCCATCAGCGAGATCGCGTTGTTCACCGCCGAAACCAGTTTGCAAC GGTTTCAGCAACTGATGAGGTTGCCCCTGTCGAGCATGGCCCAGCCTTTCACGCGTGCGTTGGAGGAAGTGCTGTTCGAG GGGTTGACGGTGTTTTTCTCGTTCGCCCTGCTGATGGTTGCGACGGCCATTCTCATGAAGCTGATCAGCAGCTGGATGCA GTTCGGATTGTTGTTCGCGCCGGAGACGTTGAAGCTCGACTTCAACCGCCTCAACCCGCTCAAGCAGCTCAAGCAGATGT TCTCCGCTCAATCGGTCATGAATCTGTTGATGAGCATCGCCAAGGCGCTGCTGCTGGGCATGGTTGTGTATCTGGTGATC AGACCTTCATTGGGCACGCTGATCAACCTGGCCAGCAGTGACCTGCAAACCTATATCCTCGCGTTGATCGCGCTGTTCCG CTACTTGCTGCACGCCTGCCTGGCCCTGCTGCTGGTGCTGGCACTCATTGACCTGGTTCTGCAAAAGCACTTTTTCGCCA AACGCATGCGCATGACCCAGGTCGAGGTCGTCAAGGAATACAAGGACATGGAAGGCGACCCGCATGTGAAGGGCAAGCGC CGCGCGTTGGCACAGGAATTGGCCCAGGAGGAACCGAAGGTCAAGCTGCCCAAGCTGGAGGAATCCGACATGCTTGTGGT CAACCCGACGCACTTTGCCGTGGCCCTGTATTACCGACCCGGCAAGACTCCGCTGCCGGTGCTGGTCAACAAGGGAACGG ACGACGAGGCTCGCGAGTTGATCCGGCAGGCGAAGGCGGCCGAGGTGCCGGTGATCCAGTGTGTCTGGCTGGCACGCACG CTCTATACGCATAAACTGGGCGCCGGTATCCCCCGCGAAACCTTGCAGGCTGTGGCGTTGATCTATCGCACCTTGCGCGA GCTGGATGATGACGCCAAGCGCGAAACCCTGGAGTTGCCTGCACTGGAGTTGCGCTGA Protein sequence : MSDSGEKKHPASAKKLRDQRKKGQVSQSQDIGKLLALTAISEIALFTAETSLQRFQQLMRLPLSSMAQPFTRALEEVLFE GLTVFFSFALLMVATAILMKLISSWMQFGLLFAPETLKLDFNRLNPLKQLKQMFSAQSVMNLLMSIAKALLLGMVVYLVI RPSLGTLINLASSDLQTYILALIALFRYLLHACLALLLVLALIDLVLQKHFFAKRMRMTQVEVVKEYKDMEGDPHVKGKR RALAQELAQEEPKVKLPKLEESDMLVVNPTHFAVALYYRPGKTPLPVLVNKGTDDEARELIRQAKAAEVPVIQCVWLART LYTHKLGAGIPRETLQAVALIYRTLRELDDDAKRETLELPALELR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | ABQ88362.1 | HrcU | Virulence | Hrp PAI | Protein | 3e-75 | 54 |
| hrcU | NP_791219.1 | type III secretion protein HrcU | Virulence | Hrp PAI | Protein | 1e-74 | 54 |
| hrpY | AAB05078.1 | HrpY | Virulence | Hrp PAI | Protein | 3e-75 | 54 |
| hrcU | AAG33887.1 | HrcU | Virulence | Hrp PAI | Protein | 1e-62 | 54 |
| hrcU | AAT96149.1 | HrcU | Virulence | T-PAI | Protein | 2e-76 | 53 |
| hrcU | AAT96203.1 | HrcU | Virulence | T-PAI | Protein | 2e-76 | 53 |
| hrcU | AAC35808.1 | hrp type III pathway protein | Virulence | Hrp PAI | Protein | 1e-64 | 52 |
| hrcU | AAT96306.1 | HrcU | Virulence | S-PAI | Protein | 3e-74 | 50 |
| hrcU | AAT96265.1 | HrcU | Virulence | S-PAI | Protein | 2e-74 | 50 |
| hrcU | AAT96346.1 | HrcU | Virulence | S-PAI | Protein | 2e-74 | 50 |
| hrcU | ABA47282.1 | HrcU | Virulence | S-PAI | Protein | 5e-74 | 50 |
| hrcU | AAB06008.1 | HrcU | Virulence | Hrp PAI | Protein | 5e-72 | 49 |
