Gene Information

Name : H045_20380 (H045_20380)
Accession : YP_007399634.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4626947 - 4628281 bp
Length : 1335 bp
Strand : -
Note : COG3522 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGTCCTGGAACAATCGCGTGGTCTGGTCGGAAGGCATGTTCATCGGAACGCAGCACTTCCAGCAGCATGACCGTTACCT
CGAGAACCTGATTGATGCCCGCAGTCGCCCGCTGTCTGCCGGCGCCTGGGGCTTTTCCGAGCTGCTGATCGACCAGGGCC
TGCTGGCCCTGGGCAAGCTGGCGATTGTCTCGGCGCGGGGCCTGTTGCCCGATGGCACGCCATTCAATATTCCCCAGGAC
GACCTGGCGCCGAGCCCGCTGAACATTGACGACAACCTGCGCGACGGCCTGGTGTACCTGGCCTTGCCGCTCAAGCGTGC
GGGTGCGCGGGACACGGTGGAGGCAGGCGAAGCGCTGGAAGCGGCGCGTTACGTGAGCCAGGTGCGCGAAGTGCGCGACG
ATAACGCACCGTTCGAAAACCGCACCCCCGTGGCCGTAGGCGCGCGTGCGTTGCGCCTGCTCACCGCCGAGGATGGCATC
AGCGACTACGCCGCCGTGGGCCTGGTGCGCATCAAGGAAAAACGCGCCGACCGCGCCTTGGTACTCGACGACACTTACAT
CCCGCCGGTGCTGGACGTGGCCGCCAGCAAACCGCTGAGCGCGTTTCGCAGTGAATTGCTCGGCCTGCTGCACCAGCGCG
GCGAAGCCCTGGCCGGTCGCGTGGTGGCTTCGGGCGCTGGCGGTGCCTCGGAGATTGCCGATTTCATGCTGCTGCAACTG
GTCAACCGTGCGCAGCCGCTGATCCAGCACATCACCCAACTGAGCCCGCTGCACCCGGAGCGTTTCTTCAGCGAACTGGT
GAGCCTGGCCGGTGAGTTCTCTACCTTTGCCACGTCGGGTCGACGCCCCCAGGAATACCCACACTACCAGCACGACGACC
TGGCCCTGAGCTTCGCTCCGGTGATGGCGGCGCTGCGTGAAGCGCTGTCGATGCTGATCGACAGCAAGGCCACGCCGATC
CCGATTGTGGAGAAAGCCTATGGTGTGCACGTCGCCATGCTGGCGGACAAGACCCTGCTCGAGAGCGCCAGTTTCATCCT
CGTGGTGCGCGCCGATGTGCCCGGCGAAACCCTGCGCGCGCGCTTCGGCCAGCAGAGCAAGGTCGGTTCGGTGGAGCACA
TCCGCGATTTGGTCAACCTGCAATTGCCGGGCATCGGCCTGTTGCCCCTGCCGGTCGCGCCGCGCCAATTGCCGTACCAC
GCAGGCTCCACCTACTACGAGTTGGACCGAGGCAGCGAACACTGGCAGCAACTGGGTAATTCCGGTGGGTTCGCTTTCCA
TATCGCCGGGCAGTTCCCGGGCTTGAACCTGGCCTTCTGGGCGATTCGAGGATAA

Protein sequence :
MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLALGKLAIVSARGLLPDGTPFNIPQD
DLAPSPLNIDDNLRDGLVYLALPLKRAGARDTVEAGEALEAARYVSQVREVRDDNAPFENRTPVAVGARALRLLTAEDGI
SDYAAVGLVRIKEKRADRALVLDDTYIPPVLDVAASKPLSAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHITQLSPLHPERFFSELVSLAGEFSTFATSGRRPQEYPHYQHDDLALSFAPVMAALREALSMLIDSKATPI
PIVEKAYGVHVAMLADKTLLESASFILVVRADVPGETLRARFGQQSKVGSVEHIRDLVNLQLPGIGLLPLPVAPRQLPYH
AGSTYYELDRGSEHWQQLGNSGGFAFHIAGQFPGLNLAFWAIRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-70 41
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 9e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_20380 YP_007399634.1 hypothetical protein VFG2065 Protein 7e-158 75
H045_20380 YP_007399634.1 hypothetical protein VFG2082 Protein 3e-87 45