Gene Information

Name : H045_19460 (H045_19460)
Accession : YP_007399450.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Resistance
Product : putative heavy metal ABC transporter membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4434226 - 4436451 bp
Length : 2226 bp
Strand : -
Note : COG2217 Cation transport ATPase

DNA sequence :
ATGAGCGACTCCCTGCACACCCACGATCACAAATCCCAAAAACTCACGCCCGTGCACAACCACGGCGGCGCCTGCTGTTC
CGGCACGCCGGCCCCGGCGCGGGTGCAACTGAGCGAGGCACCCACCGCAGGCTCGCGCCTGAGCACCTTTCGTATCGAAG
CGATGGACTGCCCCACCGAGCAGACGCTGATCCAGAACAAACTGGGCAAGCTGGCCGGCGTGCAACAGCTGGAATTCAAC
CTGATCAACCGCATCCTTGGCGTCACCCACGACCTGCCGAGCACCGCGCCAATCGTCGAAGCGATCAAATCCCTGGGGAT
GCAGGCCGAGCCGATTGAAGAGGGCGCGCCGGTTGCCGAGCCGCCAGTAAAGAAACACTGGTGGCCGCTGGCGTTGTCCG
GCGTCGGTGCGCTGGGCGCCGAGGTGCTGCATTTTTCCGGCGTGGCGCCGACCTGGCTGATTGCGCTGGTGGCCCTGGTC
TCGATCCTCAGCGGCGGCCTTACCACCTACAAAAAGGGCTGGATTGCCCTGAAGAACCTCAACCTCAACATCAACGCGCT
GATGAGCATCGCGGTAACCGGCGCCGTGTTGATCGGCCAGTGGCCGGAGGCGGCGATGGTGATGTTCCTGTTCACCGTGG
CCGAGCTGATCGAAGCCAAATCCCTGGACCGCGCGCGCAATGCCATCAGCGGCTTGATGCAGATGACGCCAGAGCAGGCG
ACGGTGCAGCAGGCGGACGGCAGCTGGGTCGAAAAGGACGTCAAAGGTATCGATCTCGGCACCATCGTGCGGGTTAAACC
CGGCGAGCGCATCGGCCTGGACGGTGAAGTCACCGCCGGCCAGTCCACCATCGACCAGGCGCCGATCACCGGTGAGAGCC
TGCCCATTGAAAAGACCGTGGGCGACAAAGTCTTCGCCGGCACCATCAATCAGGCCGGTTCCCTGGAGTACAAGGTGACG
GCTGCAGCCAATAATTCCACGCTGGCGCGGATCATCCACGCCGTGGAGCAGGCCCAGGGCGCCCGCGCGCCGACCCAGCG
CTTTGTCGACAGCTTTTCGAAGATCTACACCCCCGTGGTGTTCCTGTTTGCCCTGGGTGTGGCAATCATCCCGCCGCTGT
TCATGGCCGGCGCCTGGTTCGACTGGATCTACCGCGCCCTGGTGCTGCTGGTGGTGGCCTGCCCCTGCGCGCTGGTGATC
TCCACCCCGGTGACCATCGTCAGCGGCCTGGCGGCGGCAGCGCGCAAAGGCATTCTGATCAAGGGCGGCGTGTACCTGGA
GGGCGGCTACAAGCTCGACTACCTGGCGCTGGACAAGACCGGCACCCTCACCCACGGCAAGCCGGTGCAAACCGATTACC
TGGCGCTGTTCCCCACCGTCGAAGACAGCGCCCCCGCGCTTGCCGCCAGCCTGGCCGGGCGTTCCGACCACCCGGTGTCG
CAGGCAATCGCCAACGCGGCTGTGGATAAAAAGCTACCGGTACACGCTGTGGATAACTTTGCAGCCCTGGCCGGTCGCGG
GGTGCGCGGCGATATCAACGGCCAGACCTACCACCTGGGCAACCACCGCCTGGTGGAAGACCTGGGCCTGTGCTCGCCCG
CATTGGAAGAAAAACTGTTCGCTCTGGAGAAACAAGGCAAGTCCGTGGTGCTGCTGCTCGACGCGTCCGGCCCGCTGGCG
TTGTTCGCCGTGGCCGACACGGTGAAAGACAGCAGCCGCGAAGCCATCCGGCAATTGCACGAGCTGGGCATCAAGACCCT
GATGCTCACCGGCGACAACACCCACACAGCGCAGGCGATTGCCGCCCAGGTGGGGATCGACCAGGCCCAGGGCGACCTGT
TGCCCACCGACAAGCTGCAAGCCATCGAAACCCTCTACCAGCAGGGCCATCGCGTCGGCATGGTCGGCGACGGCATCAAC
GACGCACCGGCCCTGGCCCGCGCCGAAATCGGCTTTGCCATGGCGGCTGCGGGCACCGACACCGCCATCGAAACCGCCGA
CGTCGCGCTGATGGATGATGACTTGCGCAAGATCCCGGCCTTCATTCGTTTGTCGCGACAAACCTCGAGTATCCTCAAGC
AGAACATTGCGCTGGCGCTGGTGATCAAGGCGATCTTCCTGGCCGTCACCTTTCTTGGTATGGCCACCATGTGGATGGCG
GTGTTCGCCGACATGGGCGTGAGCCTGCTGGTGGTGTTCAATGGCCTGCGCCTGTTGCGCAAATAA

Protein sequence :
MSDSLHTHDHKSQKLTPVHNHGGACCSGTPAPARVQLSEAPTAGSRLSTFRIEAMDCPTEQTLIQNKLGKLAGVQQLEFN
LINRILGVTHDLPSTAPIVEAIKSLGMQAEPIEEGAPVAEPPVKKHWWPLALSGVGALGAEVLHFSGVAPTWLIALVALV
SILSGGLTTYKKGWIALKNLNLNINALMSIAVTGAVLIGQWPEAAMVMFLFTVAELIEAKSLDRARNAISGLMQMTPEQA
TVQQADGSWVEKDVKGIDLGTIVRVKPGERIGLDGEVTAGQSTIDQAPITGESLPIEKTVGDKVFAGTINQAGSLEYKVT
AAANNSTLARIIHAVEQAQGARAPTQRFVDSFSKIYTPVVFLFALGVAIIPPLFMAGAWFDWIYRALVLLVVACPCALVI
STPVTIVSGLAAAARKGILIKGGVYLEGGYKLDYLALDKTGTLTHGKPVQTDYLALFPTVEDSAPALAASLAGRSDHPVS
QAIANAAVDKKLPVHAVDNFAALAGRGVRGDINGQTYHLGNHRLVEDLGLCSPALEEKLFALEKQGKSVVLLLDASGPLA
LFAVADTVKDSSREAIRQLHELGIKTLMLTGDNTHTAQAIAAQVGIDQAQGDLLPTDKLQAIETLYQQGHRVGMVGDGIN
DAPALARAEIGFAMAAAGTDTAIETADVALMDDDLRKIPAFIRLSRQTSSILKQNIALALVIKAIFLAVTFLGMATMWMA
VFADMGVSLLVVFNGLRLLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 67
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 3e-119 42
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 2e-119 42
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 1e-117 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_19460 YP_007399450.1 putative heavy metal ABC transporter membrane protein BAC0298 Protein 0.0 67
H045_19460 YP_007399450.1 putative heavy metal ABC transporter membrane protein BAC0092 Protein 1e-74 42