Gene Information

Name : H045_18855 (H045_18855)
Accession : YP_007399329.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.1
Position : 4308199 - 4310196 bp
Length : 1998 bp
Strand : -
Note : COG0021 Transketolase

DNA sequence :
ATGCCCAGCCGTCGTGAGCGTGCCAACGCCATTCGTGCCCTCAGCATGGATGCCGTGCAAAAAGCCAACAGCGGCCATCC
CGGTGCCCCGATGGGCATGGCGGATATCGCCGAGGTACTTTGGCGTGATTACCTGAAACACAACCCGAGCAATCCCTCCT
TCGCCGACCGCGACCGCTTCGTGCTGTCCAACGGCCACGGCTCGATGCTGATCTATTCGCTGCTGCACCTGACCGGCTAC
GACGTCACCATCGACGACCTCAAGAGCTTCCGCCAGCTGCACAGTCGCACCCCGGGTCACCCGGAGTTCGGCTACACCCC
CGGCGTGGAGACCACCACCGGTCCCCTGGGCCAGGGCTTGGCCAACGCCGTGGGTTTTGCGCTGGCGGAAAAAGTCCTGG
GCGCGCAGTTCAACCGTCCTGGCCATGACATCGTCGATCACCACACCTATGTGTTCCTGGGTGATGGCTGCATGATGGAA
GGCATTTCCCACGAAGTCGCTTCCCTGGCCGGCACCTTGGGCCTGGGCAAGCTGATTGCCTTCTACGATGACAACGGCAT
CTCCATCGACGGCGAAGTCGAAGGCTGGTTCACCGATGACACGCCTAAACGTTTCGAAGCCTACAACTGGCAGGTGATCC
GCAACGTCGACGGCCACGATCCGGAAGAAATCAAAACCGCCATCGACACCGCGCGCAAGAGCGTGCAGCCGACCCTGATC
TGCTGCAAGACCACCATCGGCTTCGGCTCGCCGAACAAGCAGGGCAAGGAAGACTGCCACGGCGCCCCTCTGGGTGACGC
GGAAATCGCCCTGACCCGCGAAGCGCTGAAGTGGAACTACGGCCCGTTCGAAATTCCGGCCGACATTGCCGCCGAATGGG
ACGCGAAGGAAAAAGGCCTGGCTGCTGAAGCCGAGTGGGACCAGCGTTTTGCAGCCTACTCCGCCGAATTCCCGGAGTTG
GCCAACGAGCTGGTGCGTCGCCTGGCCGGTGACCTGCCTGCCGATTTCTCGGAAAAAGCCTCGGCCTACATCGCCGAAGT
CGCGGCCAAGGGCGAAACCATCGCCAGCCGTAAAGCCAGCCAGAACACCTTGAACGCCTTTGGCCCGCTGCTGCCCGAGA
TCCTCGGCGGTTCGGCCGACCTGGCCGGTTCCAACCTGACCCTGTGGAAAGGCTGCAAAGGCGTGTCGGCCGAAGACGCC
AGCGGCAACTACATGTACTACGGTGTGCGCGAGTTCGGCATGAGCGCCATCATGAACGGTGTGTCCCTGCACGGCGGCCT
GGTGCCTTACGGCGCCACCTTCCTGATGTTCATGGAATACGCGCGCAACGCCGTGCGCATGGCCGCGCTGATGAAAAAAC
GCGTGATCCATGTGTACACCCACGACTCCATCGGCCTGGGCGAAGACGGCCCGACGCACCAGCCGGTCGAGCAACTGACC
AGCCTGCGCACCACGCCGAACCTGGATTGCTGGCGCCCAGCCGACGCGGTGGAATCCGCCGTGGCCTGGAAGCATGCCAT
TGAGCGCAAGGACGGCCCTTCGGCGCTGATCTTCTCGCGTCAGAACCTGCAGCATCAGGTGCGTACCGACGCGCAGATCG
CCGACATCAGCCGTGGCGGTTATGTGCTCAAGGACTGCATCGGCGAGCCCGAACTGATTCTGATCTCCACCGGTTCCGAA
GTGGGCCTGACCGTGCAGGCCTATGACAAGCTGACCGCGCAAGGCCGCAACGTACGCGTTGTGTCCATGCCGTGCACCAG
CGTGTTCGAAGCTCAGGACGCCGGCTACAAGCAATCGGTTTTGCCGTTGCAGGTCAGCGCGCGTATCGCCGTTGAAGCGG
CACACGCCGACTACTGGTACAAGTACGTGGGCCTGGAAGGCCGCGTGATCGGCATGACCACCTACGGTGAGTCGGCGCCG
GCGCCTGCGTTGTTCGAAGAGTTCGGCTTCACCCTGGAAAACATCCTGGGTCAGGCTGAAGAGCTGCTGGAAGACTAA

Protein sequence :
MPSRRERANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWRDYLKHNPSNPSFADRDRFVLSNGHGSMLIYSLLHLTGY
DVTIDDLKSFRQLHSRTPGHPEFGYTPGVETTTGPLGQGLANAVGFALAEKVLGAQFNRPGHDIVDHHTYVFLGDGCMME
GISHEVASLAGTLGLGKLIAFYDDNGISIDGEVEGWFTDDTPKRFEAYNWQVIRNVDGHDPEEIKTAIDTARKSVQPTLI
CCKTTIGFGSPNKQGKEDCHGAPLGDAEIALTREALKWNYGPFEIPADIAAEWDAKEKGLAAEAEWDQRFAAYSAEFPEL
ANELVRRLAGDLPADFSEKASAYIAEVAAKGETIASRKASQNTLNAFGPLLPEILGGSADLAGSNLTLWKGCKGVSAEDA
SGNYMYYGVREFGMSAIMNGVSLHGGLVPYGATFLMFMEYARNAVRMAALMKKRVIHVYTHDSIGLGEDGPTHQPVEQLT
SLRTTPNLDCWRPADAVESAVAWKHAIERKDGPSALIFSRQNLQHQVRTDAQIADISRGGYVLKDCIGEPELILISTGSE
VGLTVQAYDKLTAQGRNVRVVSMPCTSVFEAQDAGYKQSVLPLQVSARIAVEAAHADYWYKYVGLEGRVIGMTTYGESAP
APALFEEFGFTLENILGQAEELLED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 72
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 66