Gene Information

Name : H045_17750 (H045_17750)
Accession : YP_007399108.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4066394 - 4067521 bp
Length : 1128 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
ATGAGCCCTGAACAGGCGGTACTCGACGCCCACTACATGGCCCGCGCCCTGGAACTGGCGCGCAAGGGCCTGTACACCAC
CCATCCCAACCCGCGCGTGGGCTGCGTGATCGTGCGTGACGGGCAAATTGTCGGCGAAGGCTGGCATGAGCGCACTGGCG
AACCCCATGCCGAGCCCAACGCCCTGCGCGCTGCAGGTAGCAAGGCGCGCGGCGCCACGGTGTACGTGACCCTCGAACCC
TGCAGCCACCATGGCCGCACGCCGCCCTGCGCCGATGCGCTGGTGACGGCCGGTGTCGCGCGGGTGGTGGCCGGCATGCA
GGATCCCAACCCGGAAGTGGCCGGGCGCGGTATGCAACGCCTGGCCCAGGCCGGTATCGAGGTGCGCAGCGGCGTGCTGG
AAGCCGAAGCGCGGGCGCTTAACCCCGGCTTTCTCAAACGCATGGAACATGGCCTGCCGTTCGTGCGGGTCAAGTTGGCG
ATGAGCCTGGACGGGCGCACCGCGATGGCCAGCGGCGAAAGCCAATGGATCACCGGCCCCGCCGCCCGCGCCGCCGTGCA
GCGCCTGCGTGCTCAAGCCAGCGTGGTATTGACTGGCGCCGACACCGTGCTGGCCGACGGTGCGCGCCTGACCGTGCGCG
CCGCCGAACTCGGTCTCGATCCCGAAACCACCGCCCTGGCCATGTCCCGCCCGCCGCTGCGCGTGCTGATCGACGGCCGT
CTGCGCGTGCCGCTCAACGCGCCATTTTTCAAGGCCGGTCCGGCGCTGGTGATCACCTGCGTCACCGCGCAAAACCAGTT
CCCCCGTGGCCCCGAATGCCTGGTGGTGCCAGGCGTTGAGGGTCAGGTTGACCTGCGCGCGGCGCTGGTGGCGCTGGCAG
CGCGTGGCGTCAACGAGGTGCTGGTGGAAGCCGGCCCGAGCCTGGCCGGTGCATTTGCCCAGCAGGGCCTGGTGGACGAA
TACGTGATTTTCGTCGCCGGCAAGTTTCTGGGCTCCGCCGCCCGGCCGTTGCTGGACTGGCCGCTTGAGAAGCTGGCCGA
TGCCCCCCAACTCAAGATCACTGACCTGCGCGCTGTGGGCGACGACTGGCGAGTCACTGCCATCCCTGTGCCAGCAGCGA
GCGTATAA

Protein sequence :
MSPEQAVLDAHYMARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNALRAAGSKARGATVYVTLEP
CSHHGRTPPCADALVTAGVARVVAGMQDPNPEVAGRGMQRLAQAGIEVRSGVLEAEARALNPGFLKRMEHGLPFVRVKLA
MSLDGRTAMASGESQWITGPAARAAVQRLRAQASVVLTGADTVLADGARLTVRAAELGLDPETTALAMSRPPLRVLIDGR
LRVPLNAPFFKAGPALVITCVTAQNQFPRGPECLVVPGVEGQVDLRAALVALAARGVNEVLVEAGPSLAGAFAQQGLVDE
YVIFVAGKFLGSAARPLLDWPLEKLADAPQLKITDLRAVGDDWRVTAIPVPAASV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-59 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-59 47