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Name : H045_00160 (H045_00160) Accession : YP_007395604.1 Strain : Pseudomonas poae RE*1-1-14 Genome accession: NC_020209 Putative virulence/resistance : Virulence Product : type III secretion protein RscV Function : - COG functional category : - COG ID : - EC number : - Position : 38151 - 40244 bp Length : 2094 bp Strand : + Note : COG4789 Type III secretory pathway, component EscV DNA sequence : GTGACGCTACTGTCTGCCATCAACCTGGCGCTGCTTAAAGTGGCGCAGCGTGCCGAAGTGCTGGGTGCCGTGGTGGTCCT GGGCATCGTATTCATTTTTATCGTGCCGCTGCCCACCTGGCTGGTAGACATCCTGATTGCAATCAACATCTGCATATCGT GCCTGTTGATCGTGCTGGCGCTGTATTTGCCAGGGCCTTTGGCGTTCTCCTCGTTTCCTTCGATTCTGCTGCTGACCACC ATGTTTCGCCTGGCGCTGTCGATCGCCACGACACGTTTGATTTTACTGGAGCAGGACGCCGGCGATATCGTCGAGGCGTT CGGCAACTTCGTGGTCGGGGGGAATCTGGCCGTCGGCATGGTGATCTTTCTGATCCTCACCCTGGTCAACTTTCTGGTGA TCACCAAGGGCTCCGAGCGGGTTGCCGAGGTCGCCGCGCGGTTCAGCCTGGACGCGATGCCGGGTAAGCAGATGTCCATC GACAGTGACCTGCGTGCCGGACTTATCGACGGCCTGCAGGCACGGGAAAAACGCGAGCAGTTGTCCCGCGAGAGCCAGTT GTTCGGTGCCATGGACGGAGCCATGAAGTTCGTCAAGGGTGATGCCATCGCCGGTTTGATTATCGTTGTGGTCAACCTGC TGGGCGGCTTCACCACGGGTATGTTTCAACACGGGTTGAGTGCGGCCGAATCGATACAGCTGTATTCGGTACTGACCATC GGCGACGGTCTGATTGCGCAGATTCCAGCCCTGCTGATCTCCCTGACGGCCGGCATGATCATCACCCGTGTGGCGCCGGA CGGTCGCAAGGGGGTGAGCAACATGGGCGCCGAAATTGCGCGGCAAATGACCAGTGAACCCAAGAGCTGGATGATTGCAT CGGTGGGCATGCTCGCGTTTGCAGTGGTGCCCGGCATGCCTACCCTGGTGTTTATCCTGATCTCGGCGGCAACCGGCTTC CTCGGTTATTACTTGATGCGTCAGCGTCAACGCGAGGAGAAGCCCAAGGAGGAAGCTGCCAATGTGGTGCGCCCTGAAGA GAACGGTAATGAAGACTTGCGAGGGTTCGATCCATCGCGGCCTTATCTGTTGCAGTTTCCTCCTTCCTTACGGGGGACGC CTGAGGTTACGGACCTTATTCACGGTATTCGTCAGGCACGAAATTCGCTGGTCGCCAATATCGGCCTGACATTGCCGCCG TTCGAAGTCGAGCTCGACGACGCGCTGGCCGCTGATGAAATGCGCTTCTGTGTGCACGAGGTGCCGATGGTCAAGGCGTC GGTGGTCACGCTTGTCGCCGTTGACCGTAAGGCGCTGGCGGTTGAGCCGGAGCATGCAGTGCCGGGACTGGCCGAGCGTG ATGAACAGGATTGGCTCTGGTTGCCACCTGATGATCCGCTGCTCGCCGACCCCGCACTTGAGCGCTTTACCGCGACCAGC CTGATCATCGAGCGCATGAGGCAGGCAATGATGCTCAGCGGGCCGCAGTTCCTGGGTATTCAGGAGAGCAAGGCAATCCT CAGCTGGCTCGAGCACAACCAGTCGGAGCTGGTGCAGGAACTGCAACGCATCATGCCGCTGTCGCGGTTTTCAGCGGTTC TGCAGCGCTTGGCCAGCGAAGGTGTACCGCTGCGTGCGGTGCGGCTGATTGTCGAGTCGCTGATCGAGCACGGTCAGCAT GAGCGCGAACCCGATGCACTCGCCGACTATGCGCGCATTGCCCTCAAGGCGCAGATCTTCCAGCAGTACAGCGAGGACGA TGGCCTGCATGCGTGGTTGTTGTCTCCCCATACCGAAAACATCCTGCGCGAGGCGTTGCGCCAGACCCAGACCGGGGTGT TCTTTGCCCTTGATAACGAAAGCAGCGCCGCGTTGGTCAACCTCCTCAACCAGGCATTTACCTTACGCGCCAGGAGCAAG AGCGTGATGTTGGTGGCACAGGACCTGCGCAGCCCCTTACGCGCTTTGTTGCTGGAAGAATTCAACCATGTGCCCGTGCT GTCTTTTGCCGAGTTGGCAAGCACGTCCAAGGTAAAAGTCCTGGGGCGTTTTGATCTGGGGCAAGACGAATTGATGCGCG GTGCGGCGGCATGA Protein sequence : MTLLSAINLALLKVAQRAEVLGAVVVLGIVFIFIVPLPTWLVDILIAINICISCLLIVLALYLPGPLAFSSFPSILLLTT MFRLALSIATTRLILLEQDAGDIVEAFGNFVVGGNLAVGMVIFLILTLVNFLVITKGSERVAEVAARFSLDAMPGKQMSI DSDLRAGLIDGLQAREKREQLSRESQLFGAMDGAMKFVKGDAIAGLIIVVVNLLGGFTTGMFQHGLSAAESIQLYSVLTI GDGLIAQIPALLISLTAGMIITRVAPDGRKGVSNMGAEIARQMTSEPKSWMIASVGMLAFAVVPGMPTLVFILISAATGF LGYYLMRQRQREEKPKEEAANVVRPEENGNEDLRGFDPSRPYLLQFPPSLRGTPEVTDLIHGIRQARNSLVANIGLTLPP FEVELDDALAADEMRFCVHEVPMVKASVVTLVAVDRKALAVEPEHAVPGLAERDEQDWLWLPPDDPLLADPALERFTATS LIIERMRQAMMLSGPQFLGIQESKAILSWLEHNQSELVQELQRIMPLSRFSAVLQRLASEGVPLRAVRLIVESLIEHGQH EREPDALADYARIALKAQIFQQYSEDDGLHAWLLSPHTENILREALRQTQTGVFFALDNESSAALVNLLNQAFTLRARSK SVMLVAQDLRSPLRALLLEEFNHVPVLSFAELASTSKVKVLGRFDLGQDELMRGAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | ABA47273.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 64 |
| hrcV | AAT96297.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 63 |
| hrcV | AAT96337.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 63 |
| hrcV | AAT96256.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 63 |
| hrcV | AAT96139.1 | HrcV | Virulence | T-PAI | Protein | 0.0 | 63 |
| hrcV | AAT96193.1 | HrcV | Virulence | T-PAI | Protein | 0.0 | 63 |
| hrcV | NP_791229.1 | type III secretion protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 62 |
| hrcV | AAB05999.2 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 62 |
| hrcV | AAR25631.1 | type III secretion protein HrcV | Not tested | Not named | Protein | 0.0 | 61 |
| hrcV | ABQ88352.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 61 |
| hrpI | AAA03015.1 | HrpI | Virulence | Hrp PAI | Protein | 0.0 | 61 |
| hrcV | AAG33877.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 61 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 8e-111 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H045_00160 | YP_007395604.1 | type III secretion protein RscV | VFG0064 | Protein | 4e-118 | 45 |
| H045_00160 | YP_007395604.1 | type III secretion protein RscV | VFG0384 | Protein | 2e-111 | 41 |
