Gene Information

Name : H045_01605 (H045_01605)
Accession : YP_007395893.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 345418 - 346170 bp
Length : 753 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAGCGTTCTGACCTCGGCATCACCCATCACCCTGCACGCCAGCGGGATCAGCAAAGCCTTCACTTCGGGACGGGTGGT
AACCCCCGTGCTGCACGACATCACCCTGGCGATACGCCCTGGCGAACTGACCCTGATCTCCGGCCCGTCCGGCTGCGGCA
AAAGCACCCTGCTCGCGATTCTCAGCGGCCTGCAACGGCCAGACCGGGGCAGCGCCTGCGCACTTGGGCAAGACCTGGGC
AGCCTCGACGCGCGCGCTCTGGAGCAGTTTCGCCTGCGGCACACCGGCTTTGTGTTCCAGGGCTTCAACCTGTTTCCGGC
GTTGACTGCGCTGCAACAGGTGGCGCTGCCCTTGAGCTACCTCGGGCTGCCGGCCAGGGAAATCCGGCAACGCGCCATCG
AAGCGCTGGAAGAGGTCGGCCTGGGTGCGCGCCTGAAACTGCGCCCGGCCGAATTGTCCGGCGGCGAAAAGCAGCGCGTC
GCGATTGCGCGGGCGGTGGCCAAGGCGCCCGAACTGCTGTTCGCCGACGAACCGACCAGTGCGCTGGACGCCGCCAACGG
CCACATCGTGATCGACATCCTGCACCGCATCGCCCGCACCCGTGGCACCACGGTGCTGTGCGTCAGTCACGACCCGCGCT
TGATCAGCAATGCCGACCGGGTGCTGACCATCGAAGACGGCCGCATCCTCAACGACACCCCTTTTCCCTTCCAGCCGGCG
ACAACCGCCGGTGCCCAGGAACCCTGCGCATGA

Protein sequence : 
MSVLTSASPITLHASGISKAFTSGRVVTPVLHDITLAIRPGELTLISGPSGCGKSTLLAILSGLQRPDRGSACALGQDLG
SLDARALEQFRLRHTGFVFQGFNLFPALTALQQVALPLSYLGLPAREIRQRAIEALEEVGLGARLKLRPAELSGGEKQRV
AIARAVAKAPELLFADEPTSALDAANGHIVIDILHRIARTRGTTVLCVSHDPRLISNADRVLTIEDGRILNDTPFPFQPA
TTAGAQEPCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_01605 YP_007395893.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-33 47