Gene Information

Name : xerD (H045_15870)
Accession : YP_007398735.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3623982 - 3624878 bp
Length : 897 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGCCCGCCATCGACCACCCTCTGATCGACCACTTCCTCGACGCCCTCTGGCTGGAAAAAGGCCTGTCGGACAACACTCG
CCAGGCCTATCGCAGCGATCTGGCCTTGTTCAATGGCTGGCTGCAGGAAAAGCACCTCGAGCTGATCAATGCCGGTCGCG
AGCTGATCCTCGATCACCTGGCCTGGCGCCTGGAGCAAAACTACAAGCCGCGTTCCACTGCACGATTTCTCTCGGGGGTG
CGCGGCTTTTACCGTTATTTGCTGCGGGAAAAGCTCATCACTCTCGACCCGACCCTGCAGATCGACATGCCGCAACTGGG
CAGGCCATTGCCCAAGTCGCTGTCAGAGGCCGACGTCGATGCCTTGCTCGCCGCCCCTGACCTGAGCGAAGCCATCGGTC
AGCGTGACCGTGCCATGCTGGAGGTGCTTTACGCGTGCGGCCTGCGAGTGACCGAGCTGATCAGCCTGACCCTTGAGCAG
ATCAACCTGCGCCAGGGCGTGCTGCGGGTGATGGGCAAGGGCAGCAAGGAGCGTCTGGTGCCCATGGGCGAGGAGGCGAT
TGTGTGGGTGGAGCGCTACATGCGCGACGCGCGCCATGAGCTGCTCGGCGGACGTCCCAGCGATGTGCTGTTCCCCAGCC
AGCGCGGTGAGCAGATGACGCGTCAGACCTTCTGGCACCGTATCAAGCACCAGGCCAAGGTCGCCGGGATCGGCAAGACC
CTGTCGCCGCATACCTTGCGCCATGCCTTCGCCACCCATTTGCTCAATCACGGTGCCGATTTGCGGGTGGTGCAAATGCT
GCTCGGCCACAGCGACTTGTCCACCACCCAGATTTATACCCACGTTGCGCGGGCACGCTTGCAGGATATGCATGCCAGGC
ACCACCCACGCGGCTGA

Protein sequence :
MPAIDHPLIDHFLDALWLEKGLSDNTRQAYRSDLALFNGWLQEKHLELINAGRELILDHLAWRLEQNYKPRSTARFLSGV
RGFYRYLLREKLITLDPTLQIDMPQLGRPLPKSLSEADVDALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQ
INLRQGVLRVMGKGSKERLVPMGEEAIVWVERYMRDARHELLGGRPSDVLFPSQRGEQMTRQTFWHRIKHQAKVAGIGKT
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDMHARHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-61 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-61 54