Gene Information

Name : H045_14165 (H045_14165)
Accession : YP_007398394.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Unknown
Product : putative phage capsid-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3277183 - 3278190 bp
Length : 1008 bp
Strand : +
Note : -

DNA sequence :
ATGCGTAACGATACTCGCGTTCTTTTCAACGCTTACCTGCAACAACTCGCCCAATTACACGGCGTGAGCGACGTCACCAC
CAAATTCACAGCCGCTCCATCCGTTGCACAGACGTTGGAAACCCGGATGCAGGAGTCGAGCGCGTTTCTCAGCTCGATCA
ACGTCTACGGCGTGGCTGAGCAGTCGGGCGAAAAAATCGGCATCGGTATCGACGGTACTATTGCCGGCACCACCGATACC
ACCCAGCAAGACCGCGAGCCACGCGACCCTACCGGCCTCGACAACCGTAGTTACACCTGCACCCAAACCAACTTCGATAC
GGGCCTGCGTTACCAGAAGCTGGATCAATGGGCCAAGTTCAAAGACTTCCAGGCGCGTATCCGTGACGCCATCATCCGGG
CCCAGGCGCTCAACCGGATCATGATTGGCTGGAACGGTACCAGCCGTGCGGCGACCTCTAAACCGGACATCAACAAGCTG
CTGCAGGACGTTAACGTCGGATGGCTGCAAAAGATGCGCCTGGAGAACCCTGCACGCGTTATGAAAGAAGTGGTCGATGG
CAGCGGCAAGATCCAGATCGGCGCGGGCAAAGACTTCGAAAACATCGACGCCCTGGTCGTCAGCATGGTCAACGAGTTCA
TCGAACCTTGGTACCAGGAAGACACTGACCTGGTGGTGATCTGCGGGCGCCAGCTGCTGGCCGACAAGTACTTCCCGATC
ATCAACAAGACCCAAGCGCCGACCGAAATGCTCGCGGCCGATATCGTCACTAGCCAGAAGCGCATCGGCAACCTGCCAGC
GGTGCGAGTGCCTCACTTCCCGCCGAACGGCCTGCTGGTTACCCGCCTCGACAACCTGTCGATCTACTGGCAGGAAGGCA
CCCGCCGCCGCACGGTGGTGGATAACGCCAAACGCGACCGTATTGAAAATTACGAGTCAGTCAATGAAGCCTACGTGATC
GAAGACCTTGGCTGCGCAGCCATGGCCGAAAACATCACCCTGAGCTAA

Protein sequence :
MRNDTRVLFNAYLQQLAQLHGVSDVTTKFTAAPSVAQTLETRMQESSAFLSSINVYGVAEQSGEKIGIGIDGTIAGTTDT
TQQDREPRDPTGLDNRSYTCTQTNFDTGLRYQKLDQWAKFKDFQARIRDAIIRAQALNRIMIGWNGTSRAATSKPDINKL
LQDVNVGWLQKMRLENPARVMKEVVDGSGKIQIGAGKDFENIDALVVSMVNEFIEPWYQEDTDLVVICGRQLLADKYFPI
INKTQAPTEMLAADIVTSQKRIGNLPAVRVPHFPPNGLLVTRLDNLSIYWQEGTRRRTVVDNAKRDRIENYESVNEAYVI
EDLGCAAMAENITLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 2e-86 60
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 2e-86 60
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 1e-75 55