Gene Information

Name : H045_12860 (H045_12860)
Accession : YP_007398133.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2971960 - 2972655 bp
Length : 696 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCACGTACTGGTCTGTGAAGACGATGAACTGATCGCCAGCGGCATCGTGGCCGGCCTCACCGCCCAGGGCTTCACCGT
GGAGCGCGTGGCGAGCGCCGGCGCGGCACGGGCGATGCTCAAGGCGGCGGCGTTCGACATCATGGTGCTCGACCTCGGCC
TGCCCGACGAAGACGGCCTCAAGCTGCTGCAGCAACAGCGCAGCCAGGGTCTGGAAATCCCGGTGCTGATCCTCACCGCG
CGGGATTCGGTAACCAACCGTGTCGACGGCCTGCAAGCCGGTGCCGACGACTACCTGCTCAAACCCTTCGACCTGCGCGA
ACTCGCCGCCCGCCTGCAAACTCTGCTGCGCCGGGTGGCGGGACGCAGCGTCAACCTGATCGAACACGGCCGCCTGGCCT
ACGATCCCAGCAGCCGTGAGACCTTCCTCGGTGGCCAGCCGGTGGATCTGTCGCGTCGTGAGCAGGCGTTGTTGCAGGCC
CTGCTGCACAACAAGGGCCGGGTACTCTCCAGCGAACAGCTCAAGGACAGCGTCTACGGCTTCAGCGACGAACTGGAAAG
CAACGCGCTCAATGTGCATATCCACCACCTGCGGCGCAAATTGGGCAATGGCATCGTCGAGACCGTGCGCGGCCTCGGTT
ATCGCCTCGGCGCTGCCGATGAGGGTCGCCCTGGTGAGGGAGAGAAGGCTTCGTGA

Protein sequence : 
MHVLVCEDDELIASGIVAGLTAQGFTVERVASAGAARAMLKAAAFDIMVLDLGLPDEDGLKLLQQQRSQGLEIPVLILTA
RDSVTNRVDGLQAGADDYLLKPFDLRELAARLQTLLRRVAGRSVNLIEHGRLAYDPSSRETFLGGQPVDLSRREQALLQA
LLHNKGRVLSSEQLKDSVYGFSDELESNALNVHIHHLRRKLGNGIVETVRGLGYRLGAADEGRPGEGEKAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-51 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_12860 YP_007398133.1 two-component system response regulator BAC0487 Protein 1e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_12860 YP_007398133.1 two-component system response regulator VFG1389 Protein 1e-26 44
H045_12860 YP_007398133.1 two-component system response regulator VFG0473 Protein 3e-39 42