Gene Information

Name : H045_12305 (H045_12305)
Accession : YP_007398022.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Virulence
Product : putative cobalamin ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2836825 - 2837829 bp
Length : 1005 bp
Strand : +
Note : COG0609 ABC-type Fe3+-siderophore transport system, permease component

DNA sequence :
ATGATGCGGACCCTGATCGCCCTCACGTTGCTGCTGATCGCCCTGCTCGCCGGGATAGCCATCGGCGAAACCGCCATCGC
GCCGCAGGTGGTGTTCAAGGTGCTGGCCAATAAACTGTGGGCGGCCGGCTACGTGCTCGACCCCATCGACGAGGGCGTGG
TGTGGAACTACCGCCTCACCCGCGCGCTGGTGGCCGCCGCCTGCGGGGCCGGGCTGGCGACTTGCGGGGTGATCCTGCAG
TCGTTGCTGCGCAACCCGTTGGCCGACCCGTACCTGCTGGGCATCAGCGCCGGCGCTTCCACCGGCGCGGTGCTGGTCGC
CTTGATCGGCGTGGGCGGCGGGCTGATCTCGTTGTCGGCGGGAGCATTCGTCGGCGCCATGGCCGCGTTCGCGCTGGTGA
CCTTGCTCGCGCGGGCCAGTGGCTCGGCACGCGGCACCGGGCAGATCATCCTCGCAGGCATCGCCGGCTCCCAGTTGTTC
AACGCACTCACTGCGTTCCTGATCACCAAATCGGCCAGCTCCGAGCAGGCGCGCGGCATCATGTTCTGGCTGCTCGGCAA
CCTCAGTGGCGTGCGCTGGCCGTCGGTGTGGCTGGCCGTGCCGGTGGCGGTCGCCGGCCTGATGGTGTGCCTGTGGCACC
GTCGCGCGCTGGATGCGTTTACTTTCGGCAGCGACTCGGCGGCTTCTCTCGGCATTCCGGTGCGCCGCGTGCAATGCGTG
CTGGTGGGCTGCGCCGCCCTGGTGACGGCGGTAATGGTGTCGATTGTCGGCGCCATCGGCTTCGTGGGCCTGGTGATTCC
CCACGCCGTACGCCTGCTGCTCGGCACCGCGCATTCGCGGCTGCTGCCAGCCAGCGCTCTGGGCGGCGCGCTGTTTCTGA
TTGCCGCCGACGTGCTCTCGCGCAGCCTGATCAAGGGCCAGGTGATTCCGGTAGGCGTGGTCACCGCACTGGTCGGCGCG
CCGGTATTTGCGTTGATCCTGATCGGCCGCAGGAACGCACGATGA

Protein sequence :
MMRTLIALTLLLIALLAGIAIGETAIAPQVVFKVLANKLWAAGYVLDPIDEGVVWNYRLTRALVAAACGAGLATCGVILQ
SLLRNPLADPYLLGISAGASTGAVLVALIGVGGGLISLSAGAFVGAMAAFALVTLLARASGSARGTGQIILAGIAGSQLF
NALTAFLITKSASSEQARGIMFWLLGNLSGVRWPSVWLAVPVAVAGLMVCLWHRRALDAFTFGSDSAASLGIPVRRVQCV
LVGCAALVTAVMVSIVGAIGFVGLVIPHAVRLLLGTAHSRLLPASALGGALFLIAADVLSRSLIKGQVIPVGVVTALVGA
PVFALILIGRRNAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 7e-32 43
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 7e-32 43
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 7e-32 43
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 5e-32 42