Gene Information

Name : H045_10930 (H045_10930)
Accession : YP_007397747.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2530197 - 2530865 bp
Length : 669 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGTTGCAGGTGCACGGTGTGCGCAAAAGCTACACCACCCCTCAGGGGCCGCTGGCGGTGCTGGCTGGCGTCGACCTGCA
TCTGGGCGAGCGCAGCAGCCTGGCGCTGATGGGGGAGTCGGGCAGCGGCAAGAGCACGTTGCTGCACCTGGTGGCCGGGC
TCGACCGTGTGGACGCCGGCAGTATCCAGGTGGGCGAGCAGCGCCTGGACCAATTGGGCGAGGCGCAACTGGCGCAGTGG
CGGCGCAGCGAAATCGGCCTGGTGTTCCAGCAGTTCAACCTGATCGGCAGTTTGCGCGTCGACGATAACCTGGCGTTCCA
GGCGCGCCTGGCTGGGCGTTTTGATCCGCAGTGGCAGGCGCAACTGGTCGAGCGCCTTGGCCTGGGCGACTTGCTCAAGC
GTTATCCCGAGCAACTCTCGGGCGGTCAGCAGCAGCGGGTCGCGGTGGGCCGCGCCCTGGCGTCACGGCCGGGCCTGCTG
TTGGCGGATGAACCCACTGGCAATCTCGACGAAGCTACCAGCGACGACGTACTGCAACTGCTGCTGGACCTGCTGCGCGA
CAGCCCCACCAGTCTGTTGATGGTCACCCATAGCCCGCGCATCGCGGCGCGGCTCGACCGCCAGGTGGTGCTGCATCGCG
GGCAGGTCGTGCCTGCTGTTGCGCCTTGA

Protein sequence :
MLQVHGVRKSYTTPQGPLAVLAGVDLHLGERSSLALMGESGSGKSTLLHLVAGLDRVDAGSIQVGEQRLDQLGEAQLAQW
RRSEIGLVFQQFNLIGSLRVDDNLAFQARLAGRFDPQWQAQLVERLGLGDLLKRYPEQLSGGQQQRVAVGRALASRPGLL
LADEPTGNLDEATSDDVLQLLLDLLRDSPTSLLMVTHSPRIAARLDRQVVLHRGQVVPAVAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_10930 YP_007397747.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-20 41