Gene Information

Name : H045_10170 (H045_10170)
Accession : YP_007397597.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Unknown
Product : ISPsy18, transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2351123 - 2352382 bp
Length : 1260 bp
Strand : +
Note : COG3328 Transposase and inactivated derivatives

DNA sequence :
ATGCCGACCAAAAAGAAACCGGCCCGTGAGGCCCCGCGAGACCTTCCATCCATTCCCCAAGAGCTGATCGACCAGTTCGT
CAGCGGCCCGATGAGTGCCGAAGCCATTCAGGATGCCTCGATGGCGTTCAAAAAGGCGCTGATCGAGCGAGCTCTTGGTG
CCGAGTTGGGCCACCACCTTGGCTATCCTCAGGGCGCGGAGCGCCCTGAGGAATCGAGTAACCAGCGCAACGGCAAGAGT
GGCAAGACGGTGCTAACCGATGACGGCCCGTTGCGTCTGGACATTCCCAGAGACCGTGATGGAAGCTTTGCTCCGATTCT
GATCCCCAAACACGAACGGCGTTTTACCGGCTTCGATGACAAGATTATCGCGATGTATGCCCGAGGCATGACGGTTCGCG
AAATCCGGGCGTTTCTCTCTGAACAGTACGGAACAGACGTCTCTCACGATTTCATCAGCTCCGTCACTGACGCAGTTTTG
GAGGAGGTTACCGCCTGGCAACAGCGACCGCTTGAACCGATGTACCCGGTAATTTTCTTCGATGCATTGCGAGTCAAAAT
TCGCGACGAAGGCCTGGTTCGCAACAAAGCGATCTACTTGGCACTGGGAGTATTGCCGGACGGAACGCGAGATATTCTGG
GCATTTGGATTGAAACAACCGAAGGCGCCAAATTTTGGATGAAGGTCTTTAACGACCTGAAAACCCGAGGCGTCGAAGAC
GTCTTGATCGCCGTAACTGACGGTCTCAAAGGCATGCCCGAAGCGCTGAGTGCTGTGTTTCCTGAGACGACGTTGCAGAC
CTGCATCGTCCACCTGATCCGTAACAGCCTCGATTACGCCCCGTGGGATAAGCGCCGTGAGCTGGCCAAGGCACTGAAAC
CGATCTATCAAGCACTCAATGCTGACGCCGCAGAACAAGCGCTACTGGCTTTCGAAGCCGGGCCTTGGGGTAAGCAATAT
CCGACAGTCGTATCGGCTTGGAAGCGTGCTTGGGATCGAGTTATCCCGTTCTTCGTGTTTCCCCCGGCGATACGCAAAGT
GATCTACACAACCAATGCCATCGAGAGTATCAATGCCCAGTTGCGCAAGGTCATCAAAACGCGAGGCCACTTCCCAACGG
ATGAGGCCGCGACAAAGCTAATCTGGCTGGCATTACGAAATATCACCGCGAACTGGGGCAGTGCGGCTCATGATTGGAAG
AAGGCAATGAATCAATTTGCGATTCTGTACGGAGATCGATTTATCAGGCCGACCTGGTAA

Protein sequence :
MPTKKKPAREAPRDLPSIPQELIDQFVSGPMSAEAIQDASMAFKKALIERALGAELGHHLGYPQGAERPEESSNQRNGKS
GKTVLTDDGPLRLDIPRDRDGSFAPILIPKHERRFTGFDDKIIAMYARGMTVREIRAFLSEQYGTDVSHDFISSVTDAVL
EEVTAWQQRPLEPMYPVIFFDALRVKIRDEGLVRNKAIYLALGVLPDGTRDILGIWIETTEGAKFWMKVFNDLKTRGVED
VLIAVTDGLKGMPEALSAVFPETTLQTCIVHLIRNSLDYAPWDKRRELAKALKPIYQALNADAAEQALLAFEAGPWGKQY
PTVVSAWKRAWDRVIPFFVFPPAIRKVIYTTNAIESINAQLRKVIKTRGHFPTDEAATKLIWLALRNITANWGSAAHDWK
KAMNQFAILYGDRFIRPTW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 5e-86 46
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 2e-94 45
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 5e-88 45
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 2e-84 44
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 5e-81 44