Gene Information

Name : H045_09990 (H045_09990)
Accession : YP_007397561.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2304380 - 2304880 bp
Length : 501 bp
Strand : -
Note : COG2077 Peroxiredoxin

DNA sequence : 
ATGGCTCAAGTCACTCTCAAAGGTAACCCTGTCCAGGTTGAAGGCGAACTGCCACAAGCCGGTTCCCAGGCGCCGGACTT
CACCCTGACCGCCGGCGACCTGTCGGACGCTACCCTGGCTTCCTTCGCCGGCAAGCGCAAAGTGTTGAACATCTTCCCAA
GCGTCGATACCCCGACCTGCGCCACCTCGGTGCGCAAGTTCAACGCCCAGGCCAACGAGCTGAGCAACACCGTGGTGCTG
TGCATTTCCTCCGACCTGCCGTTCGCCCAGGCCCGCTTCTGCGGTTCCGAAGGTTTGGAAAACGTGAAAAGCCTGTCGGA
TTTCCGCAGCGCCGCTTTCTCCCAGGATTATGGCGTCGATATCACCGACGGCCCGCTGCGCAGCCTGACCGCCCGCGCAG
TGGTGGTGCTGGACGAAAACGACAAAGTGCTGCACAGCGAGCTGGTTGCGGAAATTGGCCAGGAGCCAAACTACGAAGCC
GCCCTGGCTGTTTTGAAGTAA

Protein sequence : 
MAQVTLKGNPVQVEGELPQAGSQAPDFTLTAGDLSDATLASFAGKRKVLNIFPSVDTPTCATSVRKFNAQANELSNTVVL
CISSDLPFAQARFCGSEGLENVKSLSDFRSAAFSQDYGVDITDGPLRSLTARAVVVLDENDKVLHSELVAEIGQEPNYEA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 9e-36 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 6e-36 47
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 8e-36 46
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 6e-36 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_09990 YP_007397561.1 thiol peroxidase VFG0087 Protein 2e-36 46