Gene Information

Name : H045_09420 (H045_09420)
Accession : YP_007397447.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Resistance
Product : Cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2137059 - 2138225 bp
Length : 1167 bp
Strand : +
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
ATGAGCCAGCCTGACAAAAGCGCATTCGCCACCCGTGTGATCCACGCCGGGCAATCGCCAGACCCGAGCACCGGCGCGCT
GATGCCGCCCATCTACGCCAACTCCACCTACCTGCAGGACAGCCCCGGCGTGCACAAGGGCTTTGACTATGGCCGCTCGC
ACAACCCGACCCGCTTTGCCCTGGAGCGCTGCGTGGCGGACCTGGAAGGCGGCAGCCAGGCGTTTGCCTTCGCTTCCGGC
CTCGCGGCGATCTCCACCGTGCTGGAATTGCTCGATGCGGGCGCGCATATCGTCTCCGGCAATGACCTGTACGGCGGCAC
CTTCCGCCTGTTCGACAAGGTGCGCCAACGCAGCGCCGGGCATCGGTTCAGTTATGTCGACTTGAGCGATGTGGCGGCGT
TTGAAACGTCGTTGCAGGACGACACGCGCATGGTCTGGGTCGAAACCCCGAGCAACCCGCTGCTGAGCCTCACCGACCTG
CGCGCGGTGGCGCGTATCTGCCGTGCGCGCGGCATCATTTGCGTGGCCGACAACACCTTCGCCAGCCCATGGATCCAGCG
CCCACTGGAGCTGGGGTTTGATGTGGTCGTGCACTCCACCACCAAGTACCTCAACGGTCACTCGGATGTGATTGGTGGCA
TCGCGGTTGTCGGCGACAACCCGGAGCTGGCCGAGCGTCTGGGCTTTCTGCAGAATTCGATCGGCGCCATTGCCGGTCCC
TTCGATGCATTCCTGACGCTGCGTGGCGTGAAGACCCTGGCCCTGCGCATGGAGCGCCATTGCAGCAACGCCCTGCAACT
GGCGACGTGGCTGGAGCAGCAGCCGCAGGTGACACGGGTGCACTACCCCGGCCTTAAGTCGCACCCACAGCACGACCTGG
CGCAACAGCAGATGCACGGCTTTGGCGGGATGATTTCCGTGGACCTGAACACTGACCTGGCCGGTGCAAGACGCTTCCTG
GAGAACGTCAACCTGTTCGCCCTGGCGGAAAGCCTGGGCGGTGTGGAAAGTTTGATCGAACACCCGGCGATCATGACCCA
TGCCAGCATCCCGGCAGCTACGCGGGCCACGCTGGGGATTGGCGATGGGTTGGTGCGCCTGTCGGTAGGGGTTGAAGATG
TAGAAGACCTGCGCGCCGACCTGGCCCAGGCCCTGGCTCACATCTAA

Protein sequence :
MSQPDKSAFATRVIHAGQSPDPSTGALMPPIYANSTYLQDSPGVHKGFDYGRSHNPTRFALERCVADLEGGSQAFAFASG
LAAISTVLELLDAGAHIVSGNDLYGGTFRLFDKVRQRSAGHRFSYVDLSDVAAFETSLQDDTRMVWVETPSNPLLSLTDL
RAVARICRARGIICVADNTFASPWIQRPLELGFDVVVHSTTKYLNGHSDVIGGIAVVGDNPELAERLGFLQNSIGAIAGP
FDAFLTLRGVKTLALRMERHCSNALQLATWLEQQPQVTRVHYPGLKSHPQHDLAQQQMHGFGGMISVDLNTDLAGARRFL
ENVNLFALAESLGGVESLIEHPAIMTHASIPAATRATLGIGDGLVRLSVGVEDVEDLRADLAQALAHI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-84 48
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-83 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-59 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_09420 YP_007397447.1 Cystathionine beta-lyase BAC0207 Protein 1e-73 46