Gene Information

Name : H045_08990 (H045_08990)
Accession : YP_007397364.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2004368 - 2005888 bp
Length : 1521 bp
Strand : +
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGACATTGGCAAATAACTACGAACACCTCACCGCTGGGGCTAAATCCAAGATAGGCAAACGTACCCAAATCTTCATTAA
TGGTGAGTTCAGGGACCCGCATTCAGAAAAATACTTTTCTATCGCCGATCCTAGTAACGGTCTTGAATTAGGTCAAATCG
CACAGGCAGACCAATTTGACGTCGACCTGGCAGTGGCCGCTGCACGCAAGGCATTTGAAGACAGCGCCTGGTCCAGAATG
AGACCCTATCAACGTGAAGCTTTGATGCTGCGGCTCGCTGATCTGATTGCGGAAAATGCTCAGGAGCTTTCTGAACTCGA
GACGCTCAGCAGTGGCCGCCTTATTCGAAACACTCGCGCATTCGATGCGGACCTGTCGGTTTATACGCTGCGTTATATGG
CCGGGTGGTCCACCAAAATCTCTGGAAAAACCCTGGATCTGTCCGTTCCTTACCTGCCGGATCAAAAATTCTTTGGTTTC
ACAAAACGATCGCCACTGGGTGTCGTCGCAGCAATTACCCCGTGGAACGTTCCGCTTTGCCAAGCGGTCTGGAAATTGGC
ACCTGTTCTTGCAACGGGGTGCACTGTTGTTCTCAAGCCCGCTGAGCAAACCCCTTTCACTACTTTGCGCCTGGCGGAGC
TGTGTAATGAAGCTGGCATTCCACCTGGAGTTGTCAATGTCATTACCGGCCTAGGTCATGAAGTAGGTGCGGCGCTTGTT
GAGCACCCTGGCGTGGACAAGATAAGTTTTACAGGCTCGACTGAGACAGGGAAACGAATCGCCGCAATAGCAGCGCCCCT
GATGAAAAAATACACGCTTGAACTCGGCGGTAAGTCACCGGTCGTCATCGCCGAAGATGCCGATCTGAACATCGCTATTC
CCGGCGCTGCCTGGGCTATTTTCGGCAATCATGGTCAAAACTGCTGCGCAGGTTCTCGGCTGTACGTCCACGAACGCCAC
TACGCCGAAGTCACTGCGGGAGTCGCTGAAATCGCACGGACCATCAAAATTGGCCCGGGTCTGGATTTAAGTTCGCAGAT
GGGTCCACTCGTTCATCACGCCCACCGCGACAAGGTGATGAGCATGATCCACCAGGGCCTTGAGTCCGGTGCAGAATTAC
TGTGTGGGGGCGAAACGATCAACAGCCCTGGCGCTTATATTCAGCCTACCATTTTGACCGACCTTACAAACAACAGCATC
ACATCCCAAAAGGAGATTTTTGGGCCGGTGCTAACAGCCTTTTCCTTCAAGGACGACCGTGAGGTTATCCAGCGCGCCAA
TGCGACCTCATTTGGTTTGGGGGCCAGTATCTGGACCAAAAACGTTGATCGGATCACGAGCTTCTTCGGCGGCGTGAAGG
CAGGCACTATCTGGATCAATAACCACAATGTGCTGGATCTCAGTCTCCCCTTCGGCGGCATGAAGGATTCAGGCGCAGGT
CATGAATTGGGTGAAGAAGGCTTACTCGCTCACACGTCACTCAAGGCCGGTGTTATGCGTGTTTTTGATCAGTCTGAATG
A

Protein sequence :
MTLANNYEHLTAGAKSKIGKRTQIFINGEFRDPHSEKYFSIADPSNGLELGQIAQADQFDVDLAVAAARKAFEDSAWSRM
RPYQREALMLRLADLIAENAQELSELETLSSGRLIRNTRAFDADLSVYTLRYMAGWSTKISGKTLDLSVPYLPDQKFFGF
TKRSPLGVVAAITPWNVPLCQAVWKLAPVLATGCTVVLKPAEQTPFTTLRLAELCNEAGIPPGVVNVITGLGHEVGAALV
EHPGVDKISFTGSTETGKRIAAIAAPLMKKYTLELGGKSPVVIAEDADLNIAIPGAAWAIFGNHGQNCCAGSRLYVHERH
YAEVTAGVAEIARTIKIGPGLDLSSQMGPLVHHAHRDKVMSMIHQGLESGAELLCGGETINSPGAYIQPTILTDLTNNSI
TSQKEIFGPVLTAFSFKDDREVIQRANATSFGLGASIWTKNVDRITSFFGGVKAGTIWINNHNVLDLSLPFGGMKDSGAG
HELGEEGLLAHTSLKAGVMRVFDQSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-61 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-63 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-63 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-63 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_08990 YP_007397364.1 aldehyde dehydrogenase VFG0082 Protein 7e-62 41