|
Name : H045_08380 (H045_08380) Accession : YP_007397242.1 Strain : Pseudomonas poae RE*1-1-14 Genome accession: NC_020209 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 1864615 - 1865898 bp Length : 1284 bp Strand : - Note : COG1055 Na+/H+ antiporter NhaD and related arsenite permeases DNA sequence : ATGCTTGTCGCAATTGGCATTTTTATCTTCACCATCGTGCTCGTCATCTGGCAGCCCAAGGGCCTCGGGGTCGGCTGGAG CGCGACGCTGGGCGCGATCCTGGCCCTGGCCTTCGGTGTGATCAGCCTGGCGGATATTCCGGTGGTGTGGCACATCATCT GGAATGCCACCGGCACCTTCGTTGCCTTGATCGTGATCAGCCTGCTGCTGGACGAGGCCGGGTTCTTCGCCTGGGCCGCG CTGCACGTGGCACGCTGGGGCCGTGGTCGTGGCCGGCGATTGTTTGCCTACATGGTGCTGCTGGGTGCGCTGGTGTCGGC GCTGTTCGCCAATGATGGCGCGGCGTTGATCCTCACGCCCATCGTGATGTCGATGCTGCTGGCTCTACGCTTTTCGCCGG CGGCGACCCTGGCGTTCGTAATGGGCGCCGGCTTTATCGCCGACACGGCGAGCCTGCCGCTGGTGGTGTCGAACCTGGTC AACATCGTCTCCGCCGACTACTTCAAAATCGGCTTCAACGAATATGCCGCCGTGATGGTGCCAGTGAACGTCGTCAGCGT GGCCGCAACCCTGGCGGTGCTGCTGTGGTTTTTCCGCCGCGACATCCCGCAGACCTACGACCCCGCCGACCTGGACGACC CGGCCAGCGCGATCCGTGACCGTGGCACGTTCCGCGCCGGCTGGTGGGTACTGGGTATTCTTCTGGTAGGCTGTTTTGCC CTGGAACCCCTGGGCATTCCCATCAGCGCGATTTCCGCCGTGTGCGCGGTGCTTCTGCTGGTGATTGCTGCCAAGGGCCA CACGATTTCCACGCGCAAGGTGTTGAAGGACGCGCCGTGGCAGATCGTGATCTTTTCCCTGGGCATGTACCTGGTGGTCT ATGGCCTGCGTAACGCCGGGTTGACCGACTACCTGGCCACCTGGCTCGACACCTTCGCCACCCACGGCGTGTGGGGCGCG GCCATGGGCACCGGCGTGCTCACGGCGCTGCTGTCGTCGGTGATGAACAACCTGCCGACCGTGCTGATCGGCGCGCTGTC CATCGAGTCCAGCCATGCCGTGGGCGTGGTCAAGGACGCGATGATCTACGCCAACGTCATCGGCAGCGACCTGGGCCCGA AGATCACGCCCATTGGCAGCCTGGCCACCCTGCTGTGGCTGCATATCCTTGCGCGCAAAGGCATCACCATCAGTTGGGGC TACTACTTCAAGGTCGGCATCGTGCTGACCCTGCCGGTGTTGTTGATCACCCTCGCCGCCCTCGCCTTGCGCCTGAGTCT CTGA Protein sequence : MLVAIGIFIFTIVLVIWQPKGLGVGWSATLGAILALAFGVISLADIPVVWHIIWNATGTFVALIVISLLLDEAGFFAWAA LHVARWGRGRGRRLFAYMVLLGALVSALFANDGAALILTPIVMSMLLALRFSPAATLAFVMGAGFIADTASLPLVVSNLV NIVSADYFKIGFNEYAAVMVPVNVVSVAATLAVLLWFFRRDIPQTYDPADLDDPASAIRDRGTFRAGWWVLGILLVGCFA LEPLGIPISAISAVCAVLLLVIAAKGHTISTRKVLKDAPWQIVIFSLGMYLVVYGLRNAGLTDYLATWLDTFATHGVWGA AMGTGVLTALLSSVMNNLPTVLIGALSIESSHAVGVVKDAMIYANVIGSDLGPKITPIGSLATLLWLHILARKGITISWG YYFKVGIVLTLPVLLITLAALALRLSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 7e-130 | 74 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 9e-99 | 56 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 4e-94 | 54 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 7e-98 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H045_08380 | YP_007397242.1 | arsenical pump membrane protein | BAC0031 | Protein | 3e-127 | 73 |
| H045_08380 | YP_007397242.1 | arsenical pump membrane protein | BAC0576 | Protein | 4e-128 | 72 |
| H045_08380 | YP_007397242.1 | arsenical pump membrane protein | BAC0578 | Protein | 1e-127 | 72 |
| H045_08380 | YP_007397242.1 | arsenical pump membrane protein | BAC0577 | Protein | 4e-123 | 71 |
| H045_08380 | YP_007397242.1 | arsenical pump membrane protein | BAC0574 | Protein | 9e-98 | 55 |
| H045_08380 | YP_007397242.1 | arsenical pump membrane protein | BAC0575 | Protein | 1e-97 | 54 |
