Gene Information

Name : H045_06865 (H045_06865)
Accession : YP_007396941.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1490892 - 1492502 bp
Length : 1611 bp
Strand : -
Note : COG4172 ABC-type uncharacterized transport system, duplicated ATPase component

DNA sequence :
ATGAATCAGGACAATCTGATCGAAGTCCGCGACCTCTCCGTCGAGTTCGTCACGGGCGAGCACCACCACCGCGTGGTCAA
CAACCTCAGCTTCGACATCAAGCGCGGCGAAACCCTCGCGCTGGTCGGCGAAAGCGGGTCCGGCAAATCGGTCACCGCCC
ATTCGATCCTGCGCCTGCTGCCCTACCCGCTGGCGCGGCACCCGAGCGGCACCATCGGCTACGCCGGGCAAGACCTGCTG
ACGCTCAAGGAAAAGACCCTGCGACATATTCGCGGCAACCGCATCGCGATGATCTTCCAGGAGCCGATGACCTCATTGAA
CCCGCTGCACAGCATCGAAAAGCAGATCAACGAAGTGCTCGGCCTGCACAAGGGCCTCACCGGCAAGGTCGCCACCCGGC
GAACCCTTGAACTGCTCGAACTGGTGGGCATTCCCGAGCCACACAAGCGCCTCAAGGCCCTGCCTCACGAACTGTCAGGC
GGCCAGCGCCAGCGCGTGATGATCGCCATGGCACTGGCCAACGAGCCGGAACTGCTGATCGCCGACGAGCCGACTACCGC
CCTTGACGTCACCGTGCAACTGAAAATTCTGGAGCTGCTCAAGGAATTGCAGGCGCGGCTGGGCATGGCGCTGCTGTTGA
TCAGCCACGACTTGAACCTGGTGCGCCGTATTGCCCACAGGGTGTGCGTGATGCAACAGGGTTGCATCGTTGAACAGGCC
GACTGCGAGACCTTGTTCCAGTCGCCCCAACACCCCTACACCCAGGAACTGCTGGCGGCGGAGCCCAGCGGTGGGCCGGC
CACCAATGAAGTTGGGCCGCCATTACTGGAAGTCGACGACCTGAAGGTCTGGTTCCCGATCAAGAAGGGCTTTTTGCGTA
ACACGGTTGATTACGTCAAGGCGGTGGACGGCATCAACTTCAGCCTGCCCCAAGGCCAGACCCTGGGCATCGTCGGCGAG
AGCGGTTCGGGTAAATCCACCCTTGGCCTGGCGATCCTGCGGCTGATCGCGAGCAAGGGCGGTATTCGTTTCGAGGGTCA
GCCACTGGATCAACTCACTCAGCAACAGGTGCGGCCATTGCGTCGCGAGATGCAGGTGGTGTTCCAGGACCCGTTCGGCA
GCTTGAGCCCGCGGATGTGCGTCAGTGAAATCGTCGGTGAAGGCCTGCGCATTCACAAGATGGGTACAGCCGCCGAGCAG
GAAGCGGCAATTATTGCGGCGCTCAAGGAAGTGGGGCTGGACCCGCAGTCGCGGCACCGCTACCCCCACGAGTTTTCCGG
CGGGCAACGCCAGCGTATTGCGATTGCACGGGCGCTGGTGCTCAAGCCCAGGCTGATTTTGCTGGACGAGCCGACTTCAG
CCCTGGATCGCACGGTGCAGCGCCAGGTGGTGGAGTTGCTGCGCGGGTTGCAGGCCAAGTACAACCTGACCTACCTGTTC
ATCAGCCATGATCTGGCGGTGGTCAAGGCATTGAGTCATCAACTGATGGTGGTGAAACAGGGGCAAGTGGTGGAACAGGG
CGATGCGGCGGCGATCTTTGCTGATCCGCAGCATGGGTATACCCGTCAGTTGCTGGAGGCCGCTTTTCTGGTGCCTGCTG
CAAGGGTGTGA

Protein sequence :
MNQDNLIEVRDLSVEFVTGEHHHRVVNNLSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGTIGYAGQDLL
TLKEKTLRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGLHKGLTGKVATRRTLELLELVGIPEPHKRLKALPHELSG
GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQQGCIVEQA
DCETLFQSPQHPYTQELLAAEPSGGPATNEVGPPLLEVDDLKVWFPIKKGFLRNTVDYVKAVDGINFSLPQGQTLGIVGE
SGSGKSTLGLAILRLIASKGGIRFEGQPLDQLTQQQVRPLRREMQVVFQDPFGSLSPRMCVSEIVGEGLRIHKMGTAAEQ
EAAIIAALKEVGLDPQSRHRYPHEFSGGQRQRIAIARALVLKPRLILLDEPTSALDRTVQRQVVELLRGLQAKYNLTYLF
ISHDLAVVKALSHQLMVVKQGQVVEQGDAAAIFADPQHGYTRQLLEAAFLVPAARV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-75 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-75 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-75 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-75 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-90 42