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Name : H045_06805 (H045_06805) Accession : YP_007396929.1 Strain : Pseudomonas poae RE*1-1-14 Genome accession: NC_020209 Putative virulence/resistance : Virulence Product : ClpA/B-type protease Function : - COG functional category : - COG ID : - EC number : - Position : 1477163 - 1479601 bp Length : 2439 bp Strand : + Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGATCAATGTAGATCTGCAACAACTTATCCGCACCCTGGCCGCGCAGACCCGATACGACCTCGAGCGATCAGCCGAGCG CTGTGTTGCACGCGGTGGTCGCGAGGTGCTGGTGGAGGACCTGCTGCTGGCGTTGCTGGAACACGCCGACGGCTTACTGG TGCAGGCTCTGGCGGATGCGGGCGTGCAATTGTCGGAACTCGAGTCGACGCTTTATCCAAAGAGCGAACACAGTGCAACC CGCAACCCGGTTTTCGCGACGACGCTGGTCCACTGGTTGCAACAGGGACTGATGGTTGCGCACGTCGAATTGGGGCAGCC GGAGGTCGATCAGGGCGCCTTGTTGCTGGCGCTGCTGCGTCATCCTCTGGAACATGCGGGCAGCGCGTACCAGAAGGTGC TGAGTCGTCTGGATATCGAGCGCGTGCGCAGCTTTCTGCAAAGCAATCCGCCGCAGGCGCATACCCCGGCAGCGGACTCG TTGTTGCAGCGCTTCACCCATGACCTCACACACCAGGCACGTGAAGGTCTGATTGACCCGGTGCTGTGTCGTGATGCCGA AATTCGACAGTTGGTCGACATCCTTACCCGCCGGCGCAAGAACAACCCGATTCTGATCGGAGAGGCCGGTGTTGGGAAAA CCGCAATTGTCGAAGGCTTTGCCCTGCAAGTCGTCGCATCTCGGGTGCCGCCGTCGCTTCAGCAGGTGCGCGTACTCACT CTGGATCTGGGCCTGTTGCAAGCAGGGGCGGGGATCAAGGGTGAGTTCGAGCGCCGCCTCAAGGGGGTGATCGACGAGGT CAACGCGTCGCCCCAGCGAGTGATCCTGTTTATCGATGAGGCCCATACTCTGGTGGGCACGGGCGGGCAGGGCGGTGCGT CCGACTCGGCGAACCTGCTCAAGCCAGCTCTGGCCCGTGGCGAGCTGCGTACCATCGCCGCCACCACGTGGTCGGAATAC AAAAAATATATCGAGAAAGACCCGGCGCTGGCGCGACGCTTTCAACCGATACGGGTGGGCGAGCCCGGTGTCGAGCAAGC CGTCTCTATCCTGCGCGGGCTGGTCCCAGTCTACGAGGCCAGCCACGGTGTATACGTACGCGACGATGCCGTCGTCGCGG CGGCACACATGAGCGCGCGTTACCTGGCGGGGCGGCAGCTACCGGACAAAGCGGTGGATGTATTGGACACCGCCTGTGCA CGGGCGCGTACACATCTGGCCGTGCCCCCTGAAACGTTGCAGCGTGCAAGCGCCGAACTGGCCGAAGGCCGTCAGCACCA GCATGCGTTGCGCCGCGACGCTGATGCCGGTTTGCCCGTCGACGGATCCGTGCTGCAAGCACTGCAATCGCGGCTCAAGG CTGTTGAGTGCGAGCACCAGGCGCTGGAACAGACCTGGCTTGCACAACGTGAGCAATCACCCGAACAGCCCGAGGTTTGC CCACGCCTGGTGGCTCAGGTCATCAGCGCATGGACCGGCATTCCCGCCGAGCAACTGGTGCTTGAACACAGCGACAAGGT CCTGGGTTTTGCCGATGCGCTGCGCGCACGCATTCTTGGCCAGGATCACGCGGTGCAGGCGCTCGACCGTTGCCTGCGCG CCATGGCGGCAGGGCTGAACGAGCCTGATGCGCCGGTGGGTGTGTTTCTGCTGGTCGGACCGAGCGGCGTGGGCAAGACC GAAACGGCACTGGCGCTGGCGGACCTGCTGTACGGCGGCCGACGGTTTGTCACCACTCTCAATATGTCGGAATACCAGGA GCAACATTCACTGTCCCGATTGATCGGTGCACCGCCCGGTTATGTCGGCTATGGCGAAGGCGGCGTCCTCACCGAAGCGG TACGTCAGCGCCCGTATTCGGTGGTATTGCTCGACGAGGTGGAGAAGGCTGACCCCCAGGTGCTGAACCTGTTCTACCAG GTGTTCGACAAGGGCCTGGCCAATGATGGTGAAGGTCGTGAGATCGACTTTCGCAACACCCTGATCCTGATGACCTCCAA CCTCGGCAGCGACAGCATCAGCGCCTTGTGTGCCGATGGCCAGCGCCCCAAGCTCGAGGTTTTGCACGAGGCGATTCTTC CGTCGTTGCGCGCCTGGTTCAAGCCCGCATTGCTGGCGCGGATGCGCGTGGTGCCCTATTACCCGATTTCCGCTGAGGTG CTGGGTGAGGTGGTCAGGCTCAAGCTCGACCGTCTCGGGCAGCGGCTGGCCCGGCGCAAGCTGGCGTTCACCTATACGCC GCAATTGCTTGCGCACATGGCCCAACGCTGTGCCCATGGTGACAGCGGCGCACGCTACATCGATCAATGGATCGAGACCG ACCTGCTGCCACAGATCGTGGACCGCCTGCTCGCGGCAACGGCCGCGGGCGAGTCTCTCTCGTTGGCCCATGCGTCGCTG GACAGTACCGGCCGGCCGGCGTGTGAGTTCAGCCAATGA Protein sequence : MINVDLQQLIRTLAAQTRYDLERSAERCVARGGREVLVEDLLLALLEHADGLLVQALADAGVQLSELESTLYPKSEHSAT RNPVFATTLVHWLQQGLMVAHVELGQPEVDQGALLLALLRHPLEHAGSAYQKVLSRLDIERVRSFLQSNPPQAHTPAADS LLQRFTHDLTHQAREGLIDPVLCRDAEIRQLVDILTRRRKNNPILIGEAGVGKTAIVEGFALQVVASRVPPSLQQVRVLT LDLGLLQAGAGIKGEFERRLKGVIDEVNASPQRVILFIDEAHTLVGTGGQGGASDSANLLKPALARGELRTIAATTWSEY KKYIEKDPALARRFQPIRVGEPGVEQAVSILRGLVPVYEASHGVYVRDDAVVAAAHMSARYLAGRQLPDKAVDVLDTACA RARTHLAVPPETLQRASAELAEGRQHQHALRRDADAGLPVDGSVLQALQSRLKAVECEHQALEQTWLAQREQSPEQPEVC PRLVAQVISAWTGIPAEQLVLEHSDKVLGFADALRARILGQDHAVQALDRCLRAMAAGLNEPDAPVGVFLLVGPSGVGKT ETALALADLLYGGRRFVTTLNMSEYQEQHSLSRLIGAPPGYVGYGEGGVLTEAVRQRPYSVVLLDEVEKADPQVLNLFYQ VFDKGLANDGEGREIDFRNTLILMTSNLGSDSISALCADGQRPKLEVLHEAILPSLRAWFKPALLARMRVVPYYPISAEV LGEVVRLKLDRLGQRLARRKLAFTYTPQLLAHMAQRCAHGDSGARYIDQWIETDLLPQIVDRLLAATAAGESLSLAHASL DSTGRPACEFSQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-125 | 48 |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-106 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H045_06805 | YP_007396929.1 | ClpA/B-type protease | VFG2084 | Protein | 3e-142 | 46 |
| H045_06805 | YP_007396929.1 | ClpA/B-type protease | VFG0079 | Protein | 5e-107 | 42 |
