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Name : H045_06785 (H045_06785) Accession : YP_007396925.1 Strain : Pseudomonas poae RE*1-1-14 Genome accession: NC_020209 Putative virulence/resistance : Virulence Product : type VI secretion protein TssC2 Function : - COG functional category : - COG ID : - EC number : - Position : 1472511 - 1473986 bp Length : 1476 bp Strand : + Note : COG3517 Uncharacterized protein conserved in bacteria DNA sequence : ATGAACACTCAAGCCACCTCACTGGCTGCTCCCAGGGCAGACGAGTCGAGCATCCTCGACAACATCATTGCGCAGACCCT GCTGACGGCGGATGACGAGGCCTACGGTATCGCCAAGCGCGGTGTCTCGGCGTTTATCGAAGAGTTGGTCAAGCCGCACA ACAGCGCAGAACCGGTCAAAAAACGCCTGGTGGACCGGATGATCGCCGAGATCGACAGCAAGCTCAGCAGGCAGATGGAC GAAATTCTCCATCACCCGCAGTTCCAGGCACTGGAAGCTGCCTGGCGAGGTTTGCAGTTGCTGATCGAGCGAACCAATTT CCGTGAAAACATCAAGATCGAACTGCTGAATGTATCCCGAGCGGACTTGCTCGATGACTTCGAGGACTCGCCGGAAGTCA ACCAGTCCGGGCTCTACAAGCATATCTACAGTGCCGAGTACGGCCAGTTCGGTGGTCAGCCCGTGGGCGCCATCATCGCC AACTATTTCCTTTCACCCAGTGCGCCCGACGTAAAGCTCATGCAGTACGTTTCGACTGTCGCTTGCGTGGCTCACGCGCC TTTTATCGCAGCGGCCGGGCCAGCCTTTTTTGGCCTGGAAAGCTTTACCGGTCTGCCTGACCTGAAGGACCTCAAGGATC ATTTCGAAGGCCCGCAATTTGCCAAATGGCAGAGCTTTCGTCAGAGCGAAGACGCGCGCTACATCGGCCTCACCGTACCG CGCTTTTTGCTGCGCACGCCTTACGATCCCCTTGAATCTCCGGTCAAGACCTTTGCCTATCAGGAAAACGTGGTCAACAG TCACGAGCACTATCTGTGGGGGAATACGGCTTATGCATTTGCCACACGCTTGACCGACAGCTTCGCCAGGTTTCGTTGGT GTCCCAACATCATTGGTCCGCAAAGCGGCGGGGCGGTGGAAGACCTGCCCTTGCACCACTTTCACAGCATGGGTGAAATC GAAACGAAGATCCCCACTGAGGTGCTGGTCTCCGATCGACGCGAATATGAACTGGCCCAGGAGGGGTTCATCGCGTTGAC CATGCGCAAAGGCAGTGACAATGCGGCATTTTTCTCCGCAAGTTCGGTGCAGAAGCCCAAGTATTTCGGCACCAGTGTCG AGGGGCGGGAAGCGGAGTTGAATTACCGGCTGGGCACTCAGTTGCCGTACATGATGGTGGTCAACCGACTGGCTCATTAC CTGAAAGTGTTGCAGCGCGAGCAGTTGGGGTCGTGGAAGGAACGCACCGACCTGGAACTTGAACTCAATAAATGGATTCG TCAGTACGTCGCAGACCAGGAAAACCCCAGTGCCGAGGTGCGTGGTCGTCGACCCCTGCGTGCGGCACGCATCGTTGTCA GCGATGTTGACGGTGAGCCCGGCTGGTATCGCGTCAATCTGAGTGTGCGGCCTCACTTCAAATATATGGGGGCGGACTTC ACGCTTTCCCTTGTCGGCAAGCTCGACAAAGAATGA Protein sequence : MNTQATSLAAPRADESSILDNIIAQTLLTADDEAYGIAKRGVSAFIEELVKPHNSAEPVKKRLVDRMIAEIDSKLSRQMD EILHHPQFQALEAAWRGLQLLIERTNFRENIKIELLNVSRADLLDDFEDSPEVNQSGLYKHIYSAEYGQFGGQPVGAIIA NYFLSPSAPDVKLMQYVSTVACVAHAPFIAAAGPAFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVP RFLLRTPYDPLESPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGPQSGGAVEDLPLHHFHSMGEI ETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSASSVQKPKYFGTSVEGREAELNYRLGTQLPYMMVVNRLAHY LKVLQREQLGSWKERTDLELELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVDGEPGWYRVNLSVRPHFKYMGADF TLSLVGKLDKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-154 | 63 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 2e-154 | 63 |
| HH0247 | NP_859778.1 | hypothetical protein | Not tested | HHGI1 | Protein | 3e-149 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H045_06785 | YP_007396925.1 | type VI secretion protein TssC2 | VFG2093 | Protein | 3e-175 | 69 |
| H045_06785 | YP_007396925.1 | type VI secretion protein TssC2 | VFG2475 | Protein | 3e-163 | 65 |
