Gene Information

Name : H045_06435 (H045_06435)
Accession : YP_007396855.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Virulence
Product : response regulator GacA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1396730 - 1397371 bp
Length : 642 bp
Strand : +
Note : COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

DNA sequence : 
TTGATTAGGGTGCTAGTAGTCGATGACCATGATCTCGTTCGTACAGGCATTACACGAATGCTGGCTGACATCGACGGCCT
GCAAGTAGTTGGTCAGGCCGAGTCAGGAGAAGAATCCCTGATCAAGGCGCGGGAGTTGAAACCCGATGTGGTGTTGATGG
ACGTCAAGATGCCCGGAATCGGCGGGCTTGGCGCCACCACCAAACTGCTGCGCAGCCATCCGGACATCAAGGTCGTGGTG
GTCACCGTGTGCGAGGAAGATCCGTTTCCCACCCGCCTGTTGCAGGCCGGTGCCGCCGGTTACCTGACCAAGGGCGCAGG
CTTGGCTGAAATGGTACAGGCCATTCGCCTGGTCTTTGCCGGGCAACGCTATATCAGCCCGCAGATTGCCCAGCAGTTGG
CCATCAAGTCTTTTCAGCCCACCAGTGATTCGCCCTTCGATGCGCTCTCGGAGCGGGAAATCCAGATTGCCCTGATGATC
GTCGGCTGCCAGAAGGTACAGACGATTTCGGACAAGCTGTGCCTCTCACCCAAGACCGTCAACACCTACCGTTATCGCAT
TTTCGAGAAGCTCGCCATCAGCAGTGATGTTGAATTGACCCTGCTTGCGGTGCGTCACGGCATGGTGGACGCCAGCGCCT
GA

Protein sequence : 
MIRVLVVDDHDLVRTGITRMLADIDGLQVVGQAESGEESLIKARELKPDVVLMDVKMPGIGGLGATTKLLRSHPDIKVVV
VTVCEEDPFPTRLLQAGAAGYLTKGAGLAEMVQAIRLVFAGQRYISPQIAQQLAIKSFQPTSDSPFDALSEREIQIALMI
VGCQKVQTISDKLCLSPKTVNTYRYRIFEKLAISSDVELTLLAVRHGMVDASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-51 57
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-51 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_06435 YP_007396855.1 response regulator GacA VFG1889 Protein 2e-50 54