Gene Information

Name : H045_00585 (H045_00585)
Accession : YP_007395689.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 127160 - 128119 bp
Length : 960 bp
Strand : -
Note : COG1683 Uncharacterized conserved protein

DNA sequence : 
ATGCCCAGCACCGCAAAACCCAGGATTGGCATCAGCGCCTGCTTGCTGGGCGAAAATGTGCGCTTCAATGGCGGACACAA
ACAATCCCAGCTGTGCAGCGAGACGCTGGCCGACTATTTTGAGTTCGTGCCGCTCTGCCCTGAAGTCGCCATCGGCCTGG
GTATCCCGCGTGAAGCCATCCGCCTGGTGGGCGATGCCGCCAATCCGCAGGCGGTGGGCACCGTGCACCGCGAGCTGGAC
GTCACCCAGCCACTCGATGAGTACGGCCAACAGATGGCCCGTGAACACACAGACCTGTGCGGCTACATTTTCATGCAGAA
ATCGCCGTCCTGTGGCCTGGAACGGGTCAAGGTCTATCGCGACAACGGCGCCCCGGTCGACGGCGGCGGGCGCGGCATCT
ACGCCCAGGCATTCTGCGCGCGCCACCCCAACCTGCCGGTGGAAGAAGACGGCCGGCTGAACGACCCGGTGCTGCGGGAA
AATTTCCTCACCCGCGTGTTCGTCTACGCCAGCTGGCAACAACTGCTGGCCGAAGGCCTGACCCGTCACCGTCTGCTGTC
CTTCCATGCGCGCTACAAATATTTACTGATGGCCCACAGCCCGGTGCACTACAAAAGCCTGGGCAACCTGCTGGGCAGCA
TGAGCAAGGGCGATGACCTCCCGGCGTTGGCCGACTGTTATTTCAGCGACCTGATGACCGGCCTGAAAAAGTGCGCTACC
CGTGGCACCCACACCAATGTGCTGCAGCACATCAGTGGCTACCTCAAGCAGGCCATCAGCAGCGACGACAAGCAGGAAAT
GCAGACCGTCATCGATCAATACCGCCACGGCATCGTGCCGTTGGTGGTGCCGCTGACCCTACTCAAGCACCATTTCCGCC
AACACCCGGATCGCTACATCGCTCAGCAGGCATACCTGCAGCCGCACCCGGAAAACCTCAGCCTGCGAAATGCGATCTAA

Protein sequence : 
MPSTAKPRIGISACLLGENVRFNGGHKQSQLCSETLADYFEFVPLCPEVAIGLGIPREAIRLVGDAANPQAVGTVHRELD
VTQPLDEYGQQMAREHTDLCGYIFMQKSPSCGLERVKVYRDNGAPVDGGGRGIYAQAFCARHPNLPVEEDGRLNDPVLRE
NFLTRVFVYASWQQLLAEGLTRHRLLSFHARYKYLLMAHSPVHYKSLGNLLGSMSKGDDLPALADCYFSDLMTGLKKCAT
RGTHTNVLQHISGYLKQAISSDDKQEMQTVIDQYRHGIVPLVVPLTLLKHHFRQHPDRYIAQQAYLQPHPENLSLRNAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 2e-64 44
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 2e-64 44
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-64 44
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 2e-64 44
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 1e-64 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_00585 YP_007395689.1 hypothetical protein VFG0490 Protein 7e-65 44