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Name : H045_05620 (H045_05620) Accession : YP_007396694.1 Strain : Pseudomonas poae RE*1-1-14 Genome accession: NC_020209 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 1211401 - 1213095 bp Length : 1695 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGCACATCCCGGATACCGATCAGGTATGCGCGTGGCTGATGCGACAGGCCGGGTTGAAAACCGTTGACCTGGAGCGCGC CCGGCGCCTGTCACAGGAATCCGACGACACCGAATTGCTGGGCCTGCTCACTCGCCTGGGGCTGGTCTCGGAACTGGAGC TGGCCCGCGCCTGGGCCGACCTGCTCGGCGCCCCGTTGGTGCTGGCCGATGCCGCACCGCCGTTGCTCGATCCCTTGCCG GTACTGACCGAGCGCTTCATGCGCCATTACCAGGTGGTGCCCGTGGGCTGGAGCCAGGGCGGTTTGCGCGTGCTGGCCGC CAACCCCGCCCAGGTCTATCCGTTCCAGGCCATGGCTTATGCCTGCGACGTACCGGTGTGGCTGGCGGTGGGCCCGCGCA ATGAGGTCGAAACCCTGATCGAGCGGTACTACGGCCAGGGCCGCTCGGCCATGGGCACCCTGATCGAAAACCTCGACGAG CAGGGCGGCACGCTGGAAGACATCGAACACCTCAAGGACATGGCCTCCGAAGCGCCGGTGATTCGCCTGGTCAACCTGAT CCTGCAGCGCGCGGTGGAACATCGCGCCTCCGACATCCATATCGAACCTTTTGAAAACCAGCTCAAGGTGCGCTACCGCA TCGATGGCGTGCTGCACGAAGCCGAAGCGCCGCCATCGAGCTCATCGGCGGCGGTGATTTCGCGGGTAAAGATCATGGCG CGCCTGGACATCGCCGAGCGGCGCCTGCCCCAGGATGGCCGCATCATGCTGCGCATCCAGGGCAAGGAACTCGACTTGCG GGTGTCCACCGTACCCACCAGTTTTGGCGAATCGGTGGTGATGCGCCTGCTCGATCGGCAGACCGTGCAGTTCGATTTCC AGAGCCTGGGCTTCGACGGCCAGCGCCTGGAAACCTTCCTTGAAGTGCTGGAACGGCCCCACGGCATCCTGCTGGTCACC GGCCCCACCGGCTCGGGCAAGACCACCACGCTGTACACCGCGCTGTCGCGGCTCAATACCGCCGAGCGCAAGATCATCAC CGTTGAAGACCCGGTGGAATACCAGCTCGAAGGCATCAACCAGATCCAGGTCAAGCCGGCCATCGGCCTGGACTTTGCCG GCGCGCTGCGCTCCATCGTGCGGCAGGACCCGGACGTGATCATGATCGGTGAAATCCGCGACCTCGAAACCTGCCGCATC GCCATCCAGTCTTCGCTGACCGGCCACCTGGTGCTCTCGACCCTGCACACCAACAGCGCCGCGGCGAGTATCACGCGCCT GTTGGACATGGGCGTCGAAAGCTACCTGATCGCCTCGACGGTCAACGGCATCCTCGCCCAGCGCCTGGTGCGCCGTCTCG ACCCGGCCACCCGTGAAGCCTTCGAAGCGCCGCCGGAACTGATCGCCGAACACGGCCTCGATCGCTTCACCGAGCAGCGT CCGATTCTGCTTTACCGACCCCGCGCCGACGCGCCGGGCGGTGGCTATCATGGGCGCAGCGCAATCACCGAATTGCTGGT GATGAACGACGAACTGCGTAGCCTGCTGATGCGCCAGGCCGACGCCGCCACCCTCGAACAGGCCGCCCGCCGTGGTGGCC TGCGCACCTTGCACGAAGAGGGCCTGCGCCAGGCCGTGGCGGGTGTCACCTCGCTGGAAGAAGTGCTGCGGGTCACCCGT GGAGACGGCGCGTGA Protein sequence : MHIPDTDQVCAWLMRQAGLKTVDLERARRLSQESDDTELLGLLTRLGLVSELELARAWADLLGAPLVLADAAPPLLDPLP VLTERFMRHYQVVPVGWSQGGLRVLAANPAQVYPFQAMAYACDVPVWLAVGPRNEVETLIERYYGQGRSAMGTLIENLDE QGGTLEDIEHLKDMASEAPVIRLVNLILQRAVEHRASDIHIEPFENQLKVRYRIDGVLHEAEAPPSSSSAAVISRVKIMA RLDIAERRLPQDGRIMLRIQGKELDLRVSTVPTSFGESVVMRLLDRQTVQFDFQSLGFDGQRLETFLEVLERPHGILLVT GPTGSGKTTTLYTALSRLNTAERKIITVEDPVEYQLEGINQIQVKPAIGLDFAGALRSIVRQDPDVIMIGEIRDLETCRI AIQSSLTGHLVLSTLHTNSAAASITRLLDMGVESYLIASTVNGILAQRLVRRLDPATREAFEAPPELIAEHGLDRFTEQR PILLYRPRADAPGGGYHGRSAITELLVMNDELRSLLMRQADAATLEQAARRGGLRTLHEEGLRQAVAGVTSLEEVLRVTR GDGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-89 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-89 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H045_05620 | YP_007396694.1 | general secretion pathway protein E | VFG0182 | Protein | 4e-92 | 50 |
| H045_05620 | YP_007396694.1 | general secretion pathway protein E | VFG2048 | Protein | 5e-90 | 45 |
| H045_05620 | YP_007396694.1 | general secretion pathway protein E | VFG1876 | Protein | 4e-86 | 44 |
| H045_05620 | YP_007396694.1 | general secretion pathway protein E | VFG0112 | Protein | 2e-85 | 42 |
| H045_05620 | YP_007396694.1 | general secretion pathway protein E | VFG1880 | Protein | 2e-81 | 41 |
