Gene Information

Name : ST548_p7750 (ST548_p7750)
Accession : YP_007386848.1
Strain : Enterobacter aerogenes EA1509E
Genome accession: NC_020181
Putative virulence/resistance : Unknown
Product : Integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 566420 - 567676 bp
Length : 1257 bp
Strand : -
Note : -

DNA sequence :
ATGTCCCTTACCGACGCGAAAATCCGCACTCTCAAGCCTTCTGATAAACCCTTTAAAGTCTCCGATTCCCACGGTCTGTA
TCTGCTGGTCAAGCCGGGTGGCTCACGTCACTGGTATCTCAAGTACCGTATTAACGGTAAAGAATCGCGCATTGCGCTGG
GTGCCTATCCTGCCGTCTCCCTCTCTGATGCGCGACAGCAGCGTGAAGGTGTCCGTAAAATGCTGGCGCTGAATATCAAC
CCGGTACAGCAGCGGGCTGCTGAACGTGGCTCACGAACACCGGAGAAAGTTTTTAAAAACGTGGCGCTGGCGTGGCATAA
AAGTAACCGAAAATGGTCGCAGAACACCGCTGACCGTCTGCTTGCCAGCATGAACAATCACATCTTTCCGGTCATTGGCA
ACCTGCCTGTATCAGAACTTAAACCCCGTCATTTCATTGACCTGCTGAAAAGGATCGAGGAAAAAGGTCTGCTGGAAGTT
GCGTCCCGCACGCGGCAGCACCTGAGTAACATAATGCGCCATGCGGTTCATCAGGGGTTAATCGATACGAACCCGGCAGC
AAATCTTGGCGGCGTGACCACACCTCCTGTCAGACGGCACTATCCTGCCCTGCCACTGGAGCGGCTGCCTGAACTGCTTG
AACGTATTGAGGCATATCATCAGGGCCGTGAACTGACGCGGTTGGCCGTCCTGCTGATGCTGCATGTGTTCATTCGCTCC
AGTGAACTGCGTTTCGCCCGCTGGTCAGAGATTGATTTCACAAACCGAGTCTGGACGATACCCGCGACGCGAGAACCCAT
TATTGGCGTGCGTTATTCCGGCCGCGGGGCAAAAATGCGAATGCCGCATATCGTCCCCCTCTCAGAACAGTCCATCGCCA
TTCTGAAACAGATTAAGGATATCACCGGTAATAATGAACTGATCTTCCCCGGCGACCATAACCCGTATAAGCCAATGTGT
GAAAACACGGTCAATAAGGCACTGCGGGTGATGGGCTACGACACGAAAAAGGATATCTGTGGCCACGGCTTTCGGGCGAT
GGCATGCAGTGCGCTGATGGAATCGGGTTTATGGGCAAAGGATGCAGTAGAACGCCAGATGAGTCATCAGGAGCGCAATA
CCGTGCGCATGGCTTATATTCACAAGGCAGAACACTTGGAAGCCCGCAAGGCGATGATGCAGTGGTGGTCGGACTATCTG
GATATATGCAGAAAAGCATATGTGTCGCCTTATATGATGGTTCAGGAGAACCGCTGA

Protein sequence :
MSLTDAKIRTLKPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNIN
PVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASMNNHIFPVIGNLPVSELKPRHFIDLLKRIEEKGLLEV
ASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPALPLERLPELLERIEAYHQGRELTRLAVLLMLHVFIRS
SELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMC
ENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYL
DICRKAYVSPYMMVQENR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1051 YP_853069.1 phage integrase Not tested PAI IV APEC-O1 Protein 4e-139 98
int CAB59974.1 integrase Not tested HPI Protein 0.0 97
int CAA08754.1 integrase Not tested HPI Protein 0.0 96
int YP_002346908.1 integrase Not tested HPI Protein 0.0 95
y2393 NP_669700.1 prophage integrase Not tested HPI Protein 0.0 95
int2 NP_993013.1 integrase Not tested HPI Protein 0.0 95
int CAA21384.1 - Not tested HPI Protein 0.0 95
intB AAD37509.1 P4-like integrase Not tested PAI IV 536 Protein 5e-149 95
unnamed AAD17660.1 unknown Not tested HPI Protein 0.0 94
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 7e-121 59
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 7e-121 59
int NP_458759.1 bacteriophage integrase Not tested SPI-7 Protein 5e-120 57
int NP_807963.1 bacteriophage integrase Not tested SPI-7 Protein 5e-120 57
ECO111_3718 YP_003236059.1 putative integrase Not tested LEE Protein 4e-110 57
S4822 NP_838459.1 P4-type integrase Not tested SHI-1 Protein 5e-110 56
ORF_1 AAZ04412.1 phage integrase Not tested PAI I APEC-O1 Protein 1e-109 56
SF2964 NP_708738.1 P4-type integrase Not tested SHI-1 Protein 5e-110 56
APECO1_3534 YP_854214.1 P4-like integrase Not tested PAI I APEC-O1 Protein 1e-109 56
c5216 NP_757064.1 prophage P4 integrase Not tested PAI II CFT073 Protein 1e-109 56
int AAK00456.1 Int Not tested SHI-1 Protein 1e-101 56
int AAL51003.1 CP4-like integrase Not tested LEE Protein 5e-111 56
ECUMN_3322 YP_002414004.1 integrase Not tested Not named Protein 9e-110 56
intP4 CAE85151.1 CP4 integrase protein Not tested PAI V 536 Protein 2e-111 56
Z4313 NP_289539.1 pathogenicity island integrase Not tested OI-122 Protein 9e-110 56
int AAK16198.1 Int Not tested PAI-I AL862 Protein 7e-112 56
int ADD91747.1 P4 integrase Not tested PAI-I AL862 Protein 7e-112 56
int-phe AAL57571.1 CP4-like integrase Not tested LEE Protein 1e-110 56
int AAL51028.1 CP4-like integrase Not tested LEE Protein 1e-110 56
ECO103_3550 YP_003223418.1 integrase Not tested LEE Protein 2e-110 56
int-phe AAL60261.1 Int-phe Not tested LEE Protein 1e-110 56
ECO26_5300 YP_003232178.1 integrase Not tested LEE Protein 2e-110 56
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 7e-111 56
c3556 NP_755431.1 prophage P4 integrase Not tested PAI I CFT073 Protein 1e-110 56
int CAC81896.1 integrase Not tested LEE II Protein 4e-102 56
intB CAD42017.1 bacteriophage P4 integrase Not tested PAI II 536 Protein 3e-105 55
unnamed ABR13507.1 phage integrase Not tested PAGI-6 Protein 4e-95 50
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 7e-100 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST548_p7750 YP_007386848.1 Integrase VFG0626 Protein 2e-110 56
ST548_p7750 YP_007386848.1 Integrase VFG1693 Protein 5e-111 56
ST548_p7750 YP_007386848.1 Integrase VFG1536 Protein 2e-105 55