Gene Information

Name : ST548_p7764 (ST548_p7764)
Accession : YP_007386834.1
Strain : Enterobacter aerogenes EA1509E
Genome accession: NC_020181
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter, inner membrane permease protein SitC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 549488 - 550348 bp
Length : 861 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCTGGCTTCTGGAGCCTTTTGGTTATCAATACATGCTCAATGCCATGTGGATTTCGGCAATGGTCGGAGGAATATG
TGCTTTTTTATCCTGTTATCTGATGTTGAAGGGTTGGTCACTAATTGGCGATGCGCTGTCCCATTCTATCGTACCCGGAG
TAGCTGGCGCTTTTATGCTGGGACTGCCCTTCTCGGTGGGTGCGTTTGTTTCTGGCGGGCTGGCAGCAGGCAGCATGTTC
CTTCTTAATCAACGTACCCGTCTAAAAGAAGATGTCATCATTGGTTTGATCTTTTCATCCTTTTTCGCGCTTGGATTATT
TATCATCTCGCTGAATCCTGTTTCGGTAAATATACAATCAATCATTCTGGGAAATATCCTGGCGGTTCCGCCAGAAGATA
TTCTTCAGCTTACCGTCATTGGCATTATTTCGGTTATTACGTTGTTATTAAAATGGAGAGATTTATTACTGACCTTTTTC
GATGAAAATCATGCGCGGGCGGTAGGATTACATCCGGAAAGGCTTAAGATATTATTTTTCCTTCTGTTAACCCTCTCCAC
CGTTGCGGCATTACAGACCGTAGGCGCGTTCATGGTGATCTGCCTTGTGGTAACGCCTGGCGCAACGGCCTGGCTGCTTA
CTGATCGCTTCCCCCGCCTGGTCTGTATTGCGGTGACCATAGGCAGTGTCACCAGCTTTCTGGGTGCGTGGGCAAGTTAC
TACCTTGATGGCGTAACGGGTGGCATTATCGTGGTCGCTCAGACCCTCATTTTCTTGCTGGTGTTCATTTTCGCCCCGGT
ACATGGCTTACTGGCGAACCGCCGATCGGTTTCTCAGTCAAAAGGACCGCGTAAATGCTGA

Protein sequence : 
MSWLLEPFGYQYMLNAMWISAMVGGICAFLSCYLMLKGWSLIGDALSHSIVPGVAGAFMLGLPFSVGAFVSGGLAAGSMF
LLNQRTRLKEDVIIGLIFSSFFALGLFIISLNPVSVNIQSIILGNILAVPPEDILQLTVIGIISVITLLLKWRDLLLTFF
DENHARAVGLHPERLKILFFLLLTLSTVAALQTVGAFMVICLVVTPGATAWLLTDRFPRLVCIAVTIGSVTSFLGAWASY
YLDGVTGGIIVVAQTLIFLLVFIFAPVHGLLANRRSVSQSKGPRKC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-92 78
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-92 78
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-92 78
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-92 78
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-92 78

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST548_p7764 YP_007386834.1 Manganese ABC transporter, inner membrane permease protein SitC BAC0351 Protein 6e-93 78
ST548_p7764 YP_007386834.1 Manganese ABC transporter, inner membrane permease protein SitC BAC0441 Protein 2e-66 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST548_p7764 YP_007386834.1 Manganese ABC transporter, inner membrane permease protein SitC VFG0527 Protein 6e-93 78