Gene Information

Name : ST548_p3409 (ST548_p3409)
Accession : YP_007391189.1
Strain : Enterobacter aerogenes EA1509E
Genome accession: NC_020181
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter, inner membrane permease protein SitC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5025957 - 5026805 bp
Length : 849 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCTGGCTGCTGGAGCCGTTTGGCTATCAATACATGCTCAACGCGATGTGGGTCTCGGCATTAGTCGGCGGCGTCTG
CGCCTTTCTCTCCTGCTACCTGATGCTCAAAGGCTGGTCGCTGATTGGCGACGCCCTCTCCCACTCGATCGTTCCCGGCG
TCGCCGGCGCTTATATGCTCGGCCTGCCCTTTGCGCTCGGCGCGTTTCTCTCCGGCGGCCTGGCGGCAGGCAGCATGCTG
TTTCTTAACCAGCGTTCGCGGCTTAAAGAGGACGCCATCATCGGGCTGATTTTCTCCTCGTTTTTCGGCATCGGTCTGTT
TATGGTGTCGCTGAATCCGACCTCGGTGAACATTCAAACTATTATTCTCGGCAATATTCTCGCCATCGCTCCGGAGGATA
TTATCCAGCTGGCGGCGATTGGCTTTATTTCAATGGCGATCCTGTTGCTGAAGTGGAAAGACCTGATGGTCACCTTCTTC
GATGAGAACCACGCCCGCTCGATTGGCCTTAACACCAGCGGCCTGAAGCTGCTGTTCTTCACTCTGTTGGCTGCCTGCAC
CGTGGCGGCGCTGCAAACCGTCGGCGCGTTTCTGGTCATCTGTCTGGTCGTGACGCCCGGCGCCACCGCCTGGCTGTTAA
CCGACCGCTTCCCGCGTCTGCTGGCCATTGCCGTCGCTATCGGCAGCCTGACCAGCTTCTTCGGCGCATGGCTGAGCTAC
TACCTTGATGGCGCCACCGGCGGCATCATCGTGGTGGCGCAGACGCTGCTGTTCTTAGCTACCTTTGTCTTCGCGCCGAA
GCACGGCCTGCTGGCCAACCGCCGCCGCGCCAGGGAGGCCTCATGCTAA

Protein sequence : 
MSWLLEPFGYQYMLNAMWVSALVGGVCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFALGAFLSGGLAAGSML
FLNQRSRLKEDAIIGLIFSSFFGIGLFMVSLNPTSVNIQTIILGNILAIAPEDIIQLAAIGFISMAILLLKWKDLMVTFF
DENHARSIGLNTSGLKLLFFTLLAACTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLAIAVAIGSLTSFFGAWLSY
YLDGATGGIIVVAQTLLFLATFVFAPKHGLLANRRRAREASC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 7e-89 87
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-89 87
sitC NP_461784.1 permease Virulence SPI-1 Protein 9e-89 87
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 8e-89 87
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 8e-89 87
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-35 44
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-35 44
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-35 43
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-35 43
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 9e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST548_p3409 YP_007391189.1 Manganese ABC transporter, inner membrane permease protein SitC BAC0351 Protein 4e-89 87
ST548_p3409 YP_007391189.1 Manganese ABC transporter, inner membrane permease protein SitC BAC0441 Protein 7e-69 69
ST548_p3409 YP_007391189.1 Manganese ABC transporter, inner membrane permease protein SitC BAC0352 Protein 6e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST548_p3409 YP_007391189.1 Manganese ABC transporter, inner membrane permease protein SitC VFG0527 Protein 4e-89 87
ST548_p3409 YP_007391189.1 Manganese ABC transporter, inner membrane permease protein SitC VFG0528 Protein 5e-36 43