Gene Information

Name : ST548_p3410 (ST548_p3410)
Accession : YP_007391188.1
Strain : Enterobacter aerogenes EA1509E
Genome accession: NC_020181
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter, inner membrane permease protein SitD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5025109 - 5025963 bp
Length : 855 bp
Strand : -
Note : -

DNA sequence : 
ATGCTAACGATGCTCCTTGAACCATTACAGTTTCCGTTTATGGTCAACGCGATGCTGGTGGCGACGATCGTCGCCGTCCC
CTGCGCGCTGCTGTCGGTATTTCTGGTATTAAAAGGCTGGGCGCTGATGGGCGATGCCATGAGCCACGCGGTGTTTCCCG
GCGTGGTGGTGGCCTACATTATCGGCATCCCCTTCGCCATCGGCGCGTTTATTGCCGGCTTATTCTGCGCCGTCGCCACC
GGTTTTCTCGACGATAACAGCCGCATCAAGCGCGATACCATCATGGGGATCGTCTTCTCGGGGATGTTCGGCGCCGGGCT
GGTGCTGTACGTGGCGATTCAATCCGAGGTCCATCTCGACCATATTCTGTTTGGCGATATGCTGGGAATATCCGCCAGCG
ATATCGGGCAAACGGCGGTGATTGCGCTGGCGATTGCGCTGATTATCGGGCTAAAGTGGCGCGATTTTTTACTGCACGCC
TTTGATCCCAATCAGGCCAAAGCCAGCGGCCTGCGCTGCGGGCTGCTGCATTATGGTCTGCTGTGCATGATCGCGCTGAC
TATCGTCGCGACGTTAAAGTCGGTGGGGATTATTCTGTCGATTTCGCTGCTGATAGCGCCCGGCGCTATCGCCCTGCTGC
TGACGCGGCGCTTTGTCAGCGCATTATTGCTGGCAACGGTAATCGCCGTGGGCTGTTCGCTGGCGGGCGTCTGGCTGTCG
TTTTATCTCGATAGCGCGCCGGCGCCAACCATCGTGGTGCTATTTACCGCGCTGTTCGTGCTGGCCTTTGTCGCCAGTAC
TATCCGTGACGGTCAGAAACAAAGGGCGTCAGCAACGATCTCCGATGGCGGTTAA

Protein sequence : 
MLTMLLEPLQFPFMVNAMLVATIVAVPCALLSVFLVLKGWALMGDAMSHAVFPGVVVAYIIGIPFAIGAFIAGLFCAVAT
GFLDDNSRIKRDTIMGIVFSGMFGAGLVLYVAIQSEVHLDHILFGDMLGISASDIGQTAVIALAIALIIGLKWRDFLLHA
FDPNQAKASGLRCGLLHYGLLCMIALTIVATLKSVGIILSISLLIAPGAIALLLTRRFVSALLLATVIAVGCSLAGVWLS
FYLDSAPAPTIVVLFTALFVLAFVASTIRDGQKQRASATISDGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-74 80
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-74 80
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-74 79
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 9e-74 79
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 9e-74 79
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-30 41
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-30 41
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-30 41
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-30 41
sitC NP_461784.1 permease Virulence SPI-1 Protein 3e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST548_p3410 YP_007391188.1 Manganese ABC transporter, inner membrane permease protein SitD BAC0352 Protein 2e-74 80
ST548_p3410 YP_007391188.1 Manganese ABC transporter, inner membrane permease protein SitD BAC0442 Protein 5e-47 51
ST548_p3410 YP_007391188.1 Manganese ABC transporter, inner membrane permease protein SitD BAC0441 Protein 4e-26 43
ST548_p3410 YP_007391188.1 Manganese ABC transporter, inner membrane permease protein SitD BAC0351 Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST548_p3410 YP_007391188.1 Manganese ABC transporter, inner membrane permease protein SitD VFG0528 Protein 2e-74 80
ST548_p3410 YP_007391188.1 Manganese ABC transporter, inner membrane permease protein SitD VFG0527 Protein 1e-30 41