Gene Information

Name : ST548_p3558 (ST548_p3558)
Accession : YP_007391040.1
Strain : Enterobacter aerogenes EA1509E
Genome accession: NC_020181
Putative virulence/resistance : Virulence
Product : type 1 fimbriae anchoring protein FimD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4868922 - 4871465 bp
Length : 2544 bp
Strand : -
Note : -

DNA sequence :
GTGGCGCTCTGTTTTGTCCTGCAGGCGGGCTACGCGCAGGCTGAACTCTATTTTAACCCGCGTTTTTTAGCTGACGATCC
TGCGGCGGTGGCCGATCTTTCCGGTTTCGAAAACGGGCAAGAGGTGCCGCCCGGCACCTACCGCGTCGATATTTACCTTA
ACGACGGCTTTATGACCACTCGCGATGTCACTTTTAACCGCGGCGAAAAAGGCCATGGGTTAAGCCCGTGCCTGACCCGC
AGCCAACTGGCGGGCATGGGGGTCAATACCGCGGCGGTGAACGGGATGAGCGCCCTCGCCGCCGACGCCTGCGTGCCGCT
GACCGAACTTATCACTGATGCCACGACGCGCTTCGATGTCGGCCAGCAGCGCCTGTACCTCACCGTGCCGCAGGCTTTTA
TGGGCAACCGCGCGCGCGGCTATATTCCGCCAGAAATGTGGGATGACGGCATCAACGCTGGGCTGCTGAACTACAACTTC
ACCGGTAACAACGTCCATAACGATACCGGCGGCAGCAGCAACTACGCTTATTTAAACCTGCAAAGCGGCCTCAATCTCGG
TGCCTGGCGGCTGCGTGATAACACCACCTGGAGCTACAGCAGCGGCGGCAGCAGTTCCAGCAATGAGAACAAATGGCAAC
ACGTCAACACCTGGCTTGAGCGCGACATCACACCGCTACGCTCACGCCTGACCCTCGGCGATAGCTACACCAACGGCGAT
ATTTTCGACGGCATAAACTTCCGCGGCGCCCAGCTGGCGAGCGATGACAACATGCTGCCGGATAGCCAGAAGGGCTTTGC
GCCGGTGATCCACGGCATCGCCCGCGGCACCGCGCAGGTGTCGATCAAACAAAACGGCTATGAGATTTACCAGAGCACGG
TCCCGCCGGGCCCGTTCACCATTAACGATCTCTATGCCGCAGGCAACGGCGGCGATCTGCAGGTGACGATTAAAGAAAAC
GACGGCACCAGCCAGGTCTTCAGCGTGCCGTGGTCAACGGTGCCGGTACTGCAGCGCGAAGGGCACACCCGGTACGCGCT
GACCGCTGGCGAATATCGCAGCGGCAACGATCAGCAAGAAGAGCCGAAGTTCTTTCAGAGTACCGTGTTACACGGTCTGC
CTGCGGGCTGGACGCTGTATGGCGGTACGCAGCTCGCCGACCGCTACCGCGCCTTTAATCTCGGCGTGGGGAAAAATATG
GGCGATTTCGGCGCCGTGTCGCTGGATGTCACCCAGGCCAATGCCACCCTACCCGACGACAGCGATCATCAGGGGCAGTC
AATTCGCTTCCTCTATAACAAGTCGCTGAGCGATGTCGGCACCAATATCCAACTGGTGGGCTATCGCTACTCTACTAAAG
GTTATTACAGCTTTGCCGATACTACCTACCGCCGGATGAGCGGTTATGACGTAGAGACCCAGGATGGCGTAATCCAGGTG
AAGCCGAAATTCACCGATTACTACAACCTCGCCTACAACAAGCGCGGCAAAGTGCAGCTAAGCGTCACCCAACAGTTGGG
GCGTACCGCCACGCTCTATCTGAGCGGCAGCCATCAGACCTACTGGTCGACCGGCAAGGCGGACCAGCAGCTGCAGGCCG
GGCTCAACGCGGCGGTGGACGACATCAACTGGACGCTGAGCTACAGCCTGACCAAAAACGCCTGGCAGCAGGGCCGCGAC
CAGATGCTGGCGGTCAACGTCAATATTCCGTTCAGCCACTGGCTGCGTTCCGACAGCAAATCGGTATGGCGGCACGCCAG
CGCCAGCTACAGCATGTCGCACGATCTTGATGGTCGGATGACCAATCTGGCGGGACTTTACGGCACCCTGCTGGAAGACA
ATAACCTGAGCTATAGCGTGCAGACCGGCTACGCCAGCGGCGGCGAAGGCGATAGCAGCGGCACCGGCTACGCGGCGCTG
AACTATCGCGGCGGCTACGGCAACGCCAATGTCGGCTACAGCCGCAGCGACGGTTTCAAACAGCTCTACTACGGCGTCAG
CGGCGGTGTGCTGGCCCACGCTAACGGCGTGACCCTGAGCCAGCCGCTGAATGACACGGTGGTGCTGGTGAAAGCGCCCG
GTGCCGGTGATGTCAAAGTGGAAAACCAGACCGGGGTGCGTACCGACTGGCGCGGCTATGCGGTGCTGCCTTACGCCACC
GAATATCGCGAAAACCGGGTGGCGCTGGATACCAATACCCTTGCCGATAACGTCGATCTCGATGACGCGGTGGTCAGCGT
TGTCCCTACCCACGGCGCTATCGTGCGGGCGGACTTCAAAGCCCACGTCGGGGTCAAGTTACTAATGACGTTGACCCATA
ACGGCAAACCAGTGCCGTTTGGCGCGATGGTCACCTCTGGCAGCAATCAGAGCGGCAGTATCGTGGCCGATAACGGCCAG
GTCTACCTGAGCGGGATGCCGCTCGCCGGCAGCGTACAGGTGAAATGGGGCGAAGGCGCGGACGCCAGCTGTATGGCCAG
CTACCGCCTGCCGGAAGAGAGTCAGCGGCAGGCGCTGAGCCAGCTATCGGCAGAGTGCCGTTAA

Protein sequence :
MALCFVLQAGYAQAELYFNPRFLADDPAAVADLSGFENGQEVPPGTYRVDIYLNDGFMTTRDVTFNRGEKGHGLSPCLTR
SQLAGMGVNTAAVNGMSALAADACVPLTELITDATTRFDVGQQRLYLTVPQAFMGNRARGYIPPEMWDDGINAGLLNYNF
TGNNVHNDTGGSSNYAYLNLQSGLNLGAWRLRDNTTWSYSSGGSSSSNENKWQHVNTWLERDITPLRSRLTLGDSYTNGD
IFDGINFRGAQLASDDNMLPDSQKGFAPVIHGIARGTAQVSIKQNGYEIYQSTVPPGPFTINDLYAAGNGGDLQVTIKEN
DGTSQVFSVPWSTVPVLQREGHTRYALTAGEYRSGNDQQEEPKFFQSTVLHGLPAGWTLYGGTQLADRYRAFNLGVGKNM
GDFGAVSLDVTQANATLPDDSDHQGQSIRFLYNKSLSDVGTNIQLVGYRYSTKGYYSFADTTYRRMSGYDVETQDGVIQV
KPKFTDYYNLAYNKRGKVQLSVTQQLGRTATLYLSGSHQTYWSTGKADQQLQAGLNAAVDDINWTLSYSLTKNAWQQGRD
QMLAVNVNIPFSHWLRSDSKSVWRHASASYSMSHDLDGRMTNLAGLYGTLLEDNNLSYSVQTGYASGGEGDSSGTGYAAL
NYRGGYGNANVGYSRSDGFKQLYYGVSGGVLAHANGVTLSQPLNDTVVLVKAPGAGDVKVENQTGVRTDWRGYAVLPYAT
EYRENRVALDTNTLADNVDLDDAVVSVVPTHGAIVRADFKAHVGVKLLMTLTHNGKPVPFGAMVTSGSNQSGSIVADNGQ
VYLSGMPLAGSVQVKWGEGADASCMASYRLPEESQRQALSQLSAECR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2D AFH78429.1 putative fimbrial usher protein Virulence KpGI-5 Protein 0.0 88
sfaF CAC16953.2 SfaF protein Virulence PAI III 536 Protein 0.0 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST548_p3558 YP_007391040.1 type 1 fimbriae anchoring protein FimD VFG0876 Protein 0.0 82
ST548_p3558 YP_007391040.1 type 1 fimbriae anchoring protein FimD VFG1645 Protein 0.0 68
ST548_p3558 YP_007391040.1 type 1 fimbriae anchoring protein FimD VFG0912 Protein 0.0 68
ST548_p3558 YP_007391040.1 type 1 fimbriae anchoring protein FimD VFG0446 Protein 3e-179 50
ST548_p3558 YP_007391040.1 type 1 fimbriae anchoring protein FimD VFG0454 Protein 2e-165 44