Gene Information

Name : ST548_p5031 (ST548_p5031)
Accession : YP_007389567.1
Strain : Enterobacter aerogenes EA1509E
Genome accession: NC_020181
Putative virulence/resistance : Unknown
Product : Type IV secretory pathway, VirD4 components
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3346044 - 3348077 bp
Length : 2034 bp
Strand : +
Note : -

DNA sequence :
GTGAGGCTCGATTTCATCCTGCGCCCGGCGGTGGAGCTTTACAGCGCCAGCGCGGCCCTGCTGGCGGCAGTATGGTGCGT
GATGGCTCCGCAAACGCTGCTGCTGACGCCTTATTCCGGCTGGCTGCTGGCGCTGGCCTTGCTGGCGCTGTCTGCCCTGC
GGCTAAAGCAGGGATTACGCATCCTGCGCTTTCGCCGTCGCGTGCGTCATCTGCCGCTCTGGACACTCTCCGCCAGCCGC
ATCCCACTACTACCCAACGCCCTGTTTCTCGGGCGCGGCTTTCGCTGGCTGCCCACGCATACCCAGCGGCTGTATCTGTG
TCGCCTGCCACAGTGTGAGCACTGGCTGCGGACGGATCGCCCTTCCGCCAGCGGCGGCGATCCGTTGTTGCATGGCGTGG
AGCTGCGCGAAGGCCGCGTCACCTTACCACTACGCGACCGACCGGGGCATACACTGGTGCTCGGCACCACCCGCGTCGGT
AAAACCCGGCTGGCGGAGCTGCTGATTGCCCAGGATATTCGCCGTGGCGACATAGTGATTGTTTTTGATCCCAAGGGTGA
CGCCGACCTGCTGCGGCGTGTCTGGGCGGAGGCGCACCGCGCCGGGCGGGAAAGCGTCTTCTGGCTGTTCCATCTCGGCT
GGCCGGAAATATCCGCCCGCTACAACGCCGTCGGACGCTTTGGCCGTATCTCGGAAGTCGCCAGCCGTATTGCCGGGCAG
CTTTCCACCGAGGGCAATTCTGCCGCCTTCCGCGAGTTCGCGTGGCGCTTCGTCAACATCATCACCCGCGCCCTGGTGGC
GCTGGGCCAGCGCCCTGACTATGCCCGTATCGCCCGTCACGTTATCAACATCGACGAGCTGTTTATCGACTACGCCCGCG
TCTTTCTGCCCGGCCACGACCGACAGGCATGGGACAACGTGGTACGGATTGCAGGTGGCATCACTGAGAAAAACACACCG
CGTAATCTCCAGGGACGGGACAGCTACGTTGTCGCGCTGGAGCAGTACCTTTCCACCACCCGACTGCATGACCCTATCCT
CGACGGCCTGCGTTCCGCTGTACGCTACGACAAAACCTATTTCGACAAGATCGTCGCCTCGCTGCTGCCGCTACTGGAAA
AACTGACTACCGGGAAAATCGCGCAACTGCTGGCCCCGGACTACGGCGACCTCAACGACCCGCGTCCGGTGTTCGACTGG
CAGCAGGCCATTCGCCAGCGGGCGATTGTCTATGTCGGGCTGGATGCGCTATCTGACGCCGAGATTGCCGCCGCCGTCGG
CAACTCGATGTTTGCCGATCTGGTCAGCGTCGCCGGGCATATCTACAAGCACGGCGTGATGGATGGCCTGCCGCAGACGG
AAGAAAAAGCGGCCATCAACCTGCACTGCGATGAGTTCAGCGAACTGATGGGTGATGAATTTATTCCGCTTATTAACAAA
GGCGGTGGCGCGGGCGTGCAGGTCACGGCTTACACCCAGACGCTCTCCGATATCGAAGCCCGCATCGGCGATCGCGCCAA
AGCGGGCCAGGTGGTCGGCAACTTCAACAGCCTGATCATGATGCGGGTACGGGAAACCGCCACTGCCGAACTGCTGACCA
GACAACTGCCGCAGGTGGATGTGCTCAGCAACAGCGTCAGTTCCGGCGTCACCGACAGCCCCGACGCTCAGGGCAATATC
GGGTTTTCCAGCAACACCCAGGATCGGGTGAGCAGCGTACAGGTGCCGCTACTGGAGCCCGCCTCGCTGGTCCAGCTCCC
CAAAGGTCAGGCGTTCGCTCTGCTGGAAGGCGGCCAGCTCTGGAAATTACGTATTCCGTTACCGGACGCAGCACACGATC
CGCTGATGCCAGAAAACATCGCGCAAATCTCCCGTTATATGGAAAAACAGTACGACAGTGCGCCCGTATGGTGGAACCGC
CCGGAGACAGTTGTGACGGCGAAAAATGACCCTATTTTATGGCTGAACGACAGCGAAACCACGGAGAAACAGACCGATGA
TACCCCGGACACGCCGCCAGCTCGTGAGCGTTGA

Protein sequence :
MRLDFILRPAVELYSASAALLAAVWCVMAPQTLLLTPYSGWLLALALLALSALRLKQGLRILRFRRRVRHLPLWTLSASR
IPLLPNALFLGRGFRWLPTHTQRLYLCRLPQCEHWLRTDRPSASGGDPLLHGVELREGRVTLPLRDRPGHTLVLGTTRVG
KTRLAELLIAQDIRRGDIVIVFDPKGDADLLRRVWAEAHRAGRESVFWLFHLGWPEISARYNAVGRFGRISEVASRIAGQ
LSTEGNSAAFREFAWRFVNIITRALVALGQRPDYARIARHVINIDELFIDYARVFLPGHDRQAWDNVVRIAGGITEKNTP
RNLQGRDSYVVALEQYLSTTRLHDPILDGLRSAVRYDKTYFDKIVASLLPLLEKLTTGKIAQLLAPDYGDLNDPRPVFDW
QQAIRQRAIVYVGLDALSDAEIAAAVGNSMFADLVSVAGHIYKHGVMDGLPQTEEKAAINLHCDEFSELMGDEFIPLINK
GGGAGVQVTAYTQTLSDIEARIGDRAKAGQVVGNFNSLIMMRVRETATAELLTRQLPQVDVLSNSVSSGVTDSPDAQGNI
GFSSNTQDRVSSVQVPLLEPASLVQLPKGQAFALLEGGQLWKLRIPLPDAAHDPLMPENIAQISRYMEKQYDSAPVWWNR
PETVVTAKNDPILWLNDSETTEKQTDDTPDTPPARER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C65 AAN62159.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 62
ORF SG68 AAN62290.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 62
api27 CAF28501.1 hypothetical protein Not tested YAPI Protein 9e-178 61
YE3493 YP_001007651.1 TraG-family protein Not tested YAPI Protein 5e-178 61
YpsIP31758_3718 YP_001402672.1 hypothetical protein Not tested YAPI Protein 3e-178 61
PMI2588 YP_002152307.1 plasmid transfer protein Not tested Not named Protein 6e-175 61
STY4562 NP_458648.1 hypothetical protein Not tested SPI-7 Protein 5e-168 57
t4260 NP_807858.1 hypothetical protein Not tested SPI-7 Protein 5e-168 57
traG CAI36113.1 putative TraG family conjugative protein Not tested PPHGI-1 Protein 3e-169 56
EXA47 ABD94656.1 TraG/TraD family protein Not tested ExoU island A Protein 2e-168 56
unnamed ABR13375.1 hypothetical protein Not tested PAGI-5 Protein 1e-168 56
RL047 AAP84173.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-169 56
Pmu_03190 YP_005176218.1 conjugal transfer protein TraD Not tested ICEPmu1 Protein 2e-158 56
traD AAW83057.1 TraD Not tested GGI Protein 5e-128 47