Gene Information

Name : ST548_p5227 (ST548_p5227)
Accession : YP_007389371.1
Strain : Enterobacter aerogenes EA1509E
Genome accession: NC_020181
Putative virulence/resistance : Virulence
Product : type 1 fimbriae anchoring protein FimD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3141106 - 3143709 bp
Length : 2604 bp
Strand : -
Note : -

DNA sequence :
TTGAAACTCGATGTCTCCGCGTGCCAGTTGACGCTGGGTAGATTGCCGGCGCTTATCAGCCTGGCTCTGATCTCGGCAAG
CGTATGCACGCTGCCGAGCTGCTGGGCCGAAAACTATTTTAACCCGGCCTTTTTATCTGACGATCCGTCGAAGATCGCCG
ACCTTTCCCACTTTGAAGGCAACGGTCAGGCGCCGGGGGTTTATCGGGTCGATGTCTACCTTAATGGCGCATTGTTGACG
ACTCGCGATATCGCTTTTCGCGTCAATAACCAGGCCACTGATGGCTCTGGACTTCGTGCTTGCCTGACGCCTGAGATGCT
CAACGGCATGAACGTGAATATTAGCGCTTTCCCACAATTGGCGAAGGCCGCTACGGGCGACTGCGTCGATCTTGCGGCTA
CGATCCCTGCCGCCTCCACCGCTTTTGATTTTAGTCAGCAGCGGCTGAATATCAGCATTCCGCAGGCGGCGCTGAACAGC
CGGGCGCGGGGCTATATTCCGCCGCAAAACTGGGATGAAGGTATTAATGCGTTGTTGCTCAACTATACGTTTACCGGTGC
GAATAGCCGGGACCGCAGCGTTGGCGGCGCCAATAGCGATAGTTATTTCCTCGGCCTCAATAGCGGATTAAATCTTGGCG
CCTGGCGTTTACGTGATTACTCGACATGGAACTACAACAGCGATAATCAGCAACATAAAAGCGACTGGCAGCACATCAGC
ACCTACGTTGAACGTGATGTGGCGGCGCTGAAAGGCGAGTTGACGGCGGGCGATAGCTACACCCCCGCGGGCGTTTTCGA
CAGCCTGCCGTTTCGTGGGCTACAGCTGGCGTCTGACGACAATATGCTGCCGGACAGCATGAAAGGCTTCGCGCCGACTA
TCCACGGCATCGCCAAAAGCAACGCTCAGGTGACGATACGTCAGAACGGCTACACCATCGACCAGCGCTATGTACCGCCT
GGCGCATTCACCATCGACGATCTCTATCCGACCTCCTCCAGCGGCGATCTCAACGTTGAGATCAAGGAGTCCGACGGTAG
CATCTCCAGTTATAGCGTACCCTATGCCGCCGTACCGGTTCTGCAACGCGAGGGGCGGGTGAAATATGCCGCCACCGCGG
CGACCTATCGCGGTGATAGCAGCCAAAAACGAGAGGTGAGTTTCGGCCAGGCGACCCTGATGTGGGGGTTGCCGCATGGC
TTTACGCTGTACGGCGGAACGCAGTTTTCCTCCGATTACCGCGCGCTGGCGCTGGGCACTGGAGCTAACTTCGGCGACTG
GGGGGCGATTTCCGTCGATCTTACGCAAGCCTACAGTACGCTGGCGGATGAGAGCGAACATCAGGGGCAATCGCTGCGCT
TTTTATATGCCAAATCCTTAAACGACCTGGGCACCCATTTTCAATTGTTGGGGTATCGCTACTCAACCTCTGGTTTTTAT
ACCCTTGATGATACCGCGTGGAAGCGGATGTCAGGCTATAACGACCCGCAGGAGGATGACGGCGATCGCGATACTGGCGA
TGACTACAACCTGTATTACACCAAACGCGGCAAGGTACAGATCAACCTCTCTCAACAGTTCGGTCATTTTGGCTCACTGT
ATGTCACCGGTAGCCAACAGAGCTATTGGCACACCGATGAAACCAATAAATTGCTACAAATTGGCTACAGCGACACGCTG
GCCGGGATCTCGTGGAGCCTGTCATATAGCAGCAGCCGCACGCCCGGCGAGGAGGAACGCGACCAGGCGCTGGCGCTCAA
TATCTCATTACCGCTCAGCCAGTGGCTTTCTCACGGCGACGATATTACCCAGCGGCGTCATAACGTTTATGCGACGTTCT
CCACCAGTAGCGATGGCCACGGCGGCGTAACGCAGAATAACGGTATCAGCGGCACGTTGTTGGTTCAAAACAACCTGAGC
TACAGCGTTCAGCAGGGATACCAGAATCGGGGCGTTGGCGAGAGCGGTTCCGCCAGCCTGGAATACGATGGCGCGAAGGG
CAATCTGAATGTCGGCTACAACAACAGCAATCATGGCGATTATCGGCAACTGAATTATGGCCTCAGCGGCGGAATAGTCG
CGCATGCCCATGGCTTGACGCTCAGCCAGCCGCTGGGCGATACCAATGTCCTTATTGCCGTGCCGGGGGCAGGAAACGTC
AATATTGAAGATCAGCCGGGGATCCACACCGATAGCCGCGGCTACGCGGTGGTGCCGTATGCCACTACCTATCGCCAGAA
CCGTATGGCGCTGGACGTCAACTCGCTAAAAGACGATGTCGATATTGATGATGCGGTGATCAATGTCGTTCCCACCCAAG
GCGCGCTGGTGCTGGCCAACTTTACGGCACGGGTTGGCGAGCGAGCGCTGTTGACGTTAAGCCGTTACGGGAAACCGCTG
CCGTTTGGCGCCACGGTTTCCATTGCTGGCTCGCCTGAAGAAGGCATCGTCGGCGACGACGGGGAAGTGTATCTCTCAGG
CCTTAGCCCGCAGGGTACGCTGAAAGCACAATGGGGACAGCATCCTGACCAACAATGTCTCACTCATTATCATCTCCCTG
ACGTTAGCCAGTCTTTGGCGCGTCAGCATCTGGAATGTCGCTAA

Protein sequence :
MKLDVSACQLTLGRLPALISLALISASVCTLPSCWAENYFNPAFLSDDPSKIADLSHFEGNGQAPGVYRVDVYLNGALLT
TRDIAFRVNNQATDGSGLRACLTPEMLNGMNVNISAFPQLAKAATGDCVDLAATIPAASTAFDFSQQRLNISIPQAALNS
RARGYIPPQNWDEGINALLLNYTFTGANSRDRSVGGANSDSYFLGLNSGLNLGAWRLRDYSTWNYNSDNQQHKSDWQHIS
TYVERDVAALKGELTAGDSYTPAGVFDSLPFRGLQLASDDNMLPDSMKGFAPTIHGIAKSNAQVTIRQNGYTIDQRYVPP
GAFTIDDLYPTSSSGDLNVEIKESDGSISSYSVPYAAVPVLQREGRVKYAATAATYRGDSSQKREVSFGQATLMWGLPHG
FTLYGGTQFSSDYRALALGTGANFGDWGAISVDLTQAYSTLADESEHQGQSLRFLYAKSLNDLGTHFQLLGYRYSTSGFY
TLDDTAWKRMSGYNDPQEDDGDRDTGDDYNLYYTKRGKVQINLSQQFGHFGSLYVTGSQQSYWHTDETNKLLQIGYSDTL
AGISWSLSYSSSRTPGEEERDQALALNISLPLSQWLSHGDDITQRRHNVYATFSTSSDGHGGVTQNNGISGTLLVQNNLS
YSVQQGYQNRGVGESGSASLEYDGAKGNLNVGYNNSNHGDYRQLNYGLSGGIVAHAHGLTLSQPLGDTNVLIAVPGAGNV
NIEDQPGIHTDSRGYAVVPYATTYRQNRMALDVNSLKDDVDIDDAVINVVPTQGALVLANFTARVGERALLTLSRYGKPL
PFGATVSIAGSPEEGIVGDDGEVYLSGLSPQGTLKAQWGQHPDQQCLTHYHLPDVSQSLARQHLECR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2D AFH78429.1 putative fimbrial usher protein Virulence KpGI-5 Protein 0.0 53
sfaF CAC16953.2 SfaF protein Virulence PAI III 536 Protein 0.0 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST548_p5227 YP_007389371.1 type 1 fimbriae anchoring protein FimD VFG0876 Protein 0.0 52
ST548_p5227 YP_007389371.1 type 1 fimbriae anchoring protein FimD VFG0446 Protein 0.0 51
ST548_p5227 YP_007389371.1 type 1 fimbriae anchoring protein FimD VFG1645 Protein 0.0 49
ST548_p5227 YP_007389371.1 type 1 fimbriae anchoring protein FimD VFG0912 Protein 0.0 49
ST548_p5227 YP_007389371.1 type 1 fimbriae anchoring protein FimD VFG0454 Protein 4e-165 45