Gene Information

Name : ST548_p5781 (ST548_p5781)
Accession : YP_007388817.1
Strain : Enterobacter aerogenes EA1509E
Genome accession: NC_020181
Putative virulence/resistance : Resistance
Product : Transcriptional activator RamA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2563749 - 2564090 bp
Length : 342 bp
Strand : -
Note : -

DNA sequence : 
ATGAATATATCCGCTCAGGTGATTGACACTATCGTGGAATGGATTGATGACAATCTACATCAGCCACTGCGAATTGATGA
TATTGCGCGCCATGCCGGATACTCGAAATGGCATCTGCAACGGCTGTTTTTGCAGTATAAAGGGGAAAGTCTCGGGCGCT
ACATTCGCGAGCGTAAACTGCTGCTGGCAGCGCGCGACCTGCGCGATACCGATCAGCGGGTTTATGATATCTGCCTGAAA
TACGGCTTTGATTCGCAGCAGACCTTTACCCGTATTTTTACCCGTACCTTCAATCAGCCGCCGGGCGCGTATCGCAAAGA
GAACCACAGCCGTGCGCACTGA

Protein sequence : 
MNISAQVIDTIVEWIDDNLHQPLRIDDIARHAGYSKWHLQRLFLQYKGESLGRYIRERKLLLAARDLRDTDQRVYDICLK
YGFDSQQTFTRIFTRTFNQPPGAYRKENHSRAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 1e-15 51
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 4e-14 46
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 4e-14 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST548_p5781 YP_007388817.1 Transcriptional activator RamA CP001138.1.gene612.p Protein 6e-36 92
ST548_p5781 YP_007388817.1 Transcriptional activator RamA CP001138.1.gene4488. Protein 4e-16 51
ST548_p5781 YP_007388817.1 Transcriptional activator RamA CP001918.1.gene327.p Protein 4e-16 50
ST548_p5781 YP_007388817.1 Transcriptional activator RamA CP000647.1.gene4499. Protein 5e-16 50
ST548_p5781 YP_007388817.1 Transcriptional activator RamA BAC0371 Protein 5e-15 48
ST548_p5781 YP_007388817.1 Transcriptional activator RamA NC_002695.1.914293.p Protein 5e-15 48
ST548_p5781 YP_007388817.1 Transcriptional activator RamA CP000034.1.gene4505. Protein 9e-15 47
ST548_p5781 YP_007388817.1 Transcriptional activator RamA CP001918.1.gene2033. Protein 1e-15 47
ST548_p5781 YP_007388817.1 Transcriptional activator RamA CP000647.1.gene1624. Protein 3e-15 47
ST548_p5781 YP_007388817.1 Transcriptional activator RamA CP001138.1.gene1637. Protein 6e-16 46
ST548_p5781 YP_007388817.1 Transcriptional activator RamA NC_010558.1.6276025. Protein 2e-14 46
ST548_p5781 YP_007388817.1 Transcriptional activator RamA NC_002695.1.917339.p Protein 4e-16 45
ST548_p5781 YP_007388817.1 Transcriptional activator RamA BAC0560 Protein 4e-16 45
ST548_p5781 YP_007388817.1 Transcriptional activator RamA CP000034.1.gene1596. Protein 3e-16 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST548_p5781 YP_007388817.1 Transcriptional activator RamA VFG0585 Protein 4e-16 51
ST548_p5781 YP_007388817.1 Transcriptional activator RamA VFG1038 Protein 2e-14 46