Gene Information

Name : A284_02155 (A284_02155)
Accession : YP_007384204.1
Strain : Staphylococcus warneri SG1
Genome accession: NC_020164
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 475312 - 476604 bp
Length : 1293 bp
Strand : -
Note : COG1055 Na+/H+ antiporter NhaD and related arsenite permeases

DNA sequence :
ATGATGACCATTCTTGCTATCGTCATATTCCTTATCACACTCGTCTTTGTAATTTGGCAACCTAAAGGATTAGATATTGG
TATTACTGCTGTCATTGGTGCCATCGCCGCAATCATTACAGGTGTTGTTAGCCTTTCAGATGTGGTTGAAGTAACTCAAA
TTGTTTGGAATGCCACATTAACCTTTGTTGCAATTATATTAATATCGTTAATTCTAGACCAAATCGGCTTTTTCGAGTGG
GCAGCATTGCATATGGTGCGAGCATCTAAAGGTAATGGTCTCATGATGTTTGTTTTAATCATGGTTCTCGGTGCAATCGT
CGCTGCTTTCTTTGCCAACGACGGAGCCGCATTAATCTTAACTCCTATCGTTTTAGCTATGGTTCGTCATTTAGGATTCA
ATGAGAAAATGGTCTTTCCATTTATTATTGCCAGTGGATTTATTGCAGATACGACGTCGCTACCAATGATTATTAGTAAT
TTGGTTAATATTGTCTCAGCCGATTACTTTGGCATAGGTTTTGGTGAATATATGAGTCGTATGATGATACCTAACATATT
CTCATTAATTGCCAGTATCGTCGTTTTATGGATTTATTTCAGAAAATCAATTCCAAAACGTGTCGATACCACTCATATCA
ATCATCCGTCATCTGCCTTAAAAGATTTACGTCTATTCCGAATCTCTTGGATTGTCCTTGTAGTATTGATGATTGGTTAT
TTTGTAAGTGAATGGCTACAAATACCTGTTTCATTGATTGCAGGTGCCATTGCTATCATATTTGTATTACTCGCAAGACA
ATCGAATGCTGTTCATACGAAACAAGTCATTAAAGGCGCACCATGGAATATTGTCATCTTTTCAATTGGCATGTATTTAG
TCGTTTTCGGCTTGAAAAATGCCGGTATCACAACTATATTAGCTCATACACTTTCAAACATTTCAGTTCATGGTTTATTC
GCTAGTATTATGAGTATGGGCTTTATTTCAGCTATTCTTTCTTCAATTATGAACAATTTACCAACTGTCTTAATTGATGC
GATTGCAATTGGTCAGTCAGGCGTATCTCATTCACTCAAAGAAGGTATGATCTATAGTAATGTGATTGGTTCAGATTTAG
GTCCTAAAATCACACCAATAGGTTCACTTGCGACATTATTATGGTTACATGTATTAGCACAAAAAGGCGTCAAAATTTCT
TGGGGAACATACTTTAAAACAGGTGTCGTAATCACCATTCCAGTCTTATTCTTCACGTTATTAGGACTATATTTAACACT
AATCATTTTTTAA

Protein sequence :
MMTILAIVIFLITLVFVIWQPKGLDIGITAVIGAIAAIITGVVSLSDVVEVTQIVWNATLTFVAIILISLILDQIGFFEW
AALHMVRASKGNGLMMFVLIMVLGAIVAAFFANDGAALILTPIVLAMVRHLGFNEKMVFPFIIASGFIADTTSLPMIISN
LVNIVSADYFGIGFGEYMSRMMIPNIFSLIASIVVLWIYFRKSIPKRVDTTHINHPSSALKDLRLFRISWIVLVVLMIGY
FVSEWLQIPVSLIAGAIAIIFVLLARQSNAVHTKQVIKGAPWNIVIFSIGMYLVVFGLKNAGITTILAHTLSNISVHGLF
ASIMSMGFISAILSSIMNNLPTVLIDAIAIGQSGVSHSLKEGMIYSNVIGSDLGPKITPIGSLATLLWLHVLAQKGVKIS
WGTYFKTGVVITIPVLFFTLLGLYLTLIIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-140 82
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 4e-139 80
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 5e-143 80
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 3e-97 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A284_02155 YP_007384204.1 arsenical pump membrane protein BAC0574 Protein 2e-141 82
A284_02155 YP_007384204.1 arsenical pump membrane protein BAC0575 Protein 3e-144 81
A284_02155 YP_007384204.1 arsenical pump membrane protein BAC0578 Protein 8e-99 58
A284_02155 YP_007384204.1 arsenical pump membrane protein BAC0576 Protein 6e-98 58
A284_02155 YP_007384204.1 arsenical pump membrane protein BAC0577 Protein 6e-97 56
A284_02155 YP_007384204.1 arsenical pump membrane protein BAC0031 Protein 3e-93 55