Gene Information

Name : A284_11600 (A284_11600)
Accession : YP_007386077.1
Strain : Staphylococcus warneri SG1
Genome accession: NC_020164
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein VraD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2453474 - 2454121 bp
Length : 648 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGGGGCCATCAGGATCCGGTAAAACAACCCTTCTAAATGTCTTAAGTTCAATTGATACTATTTCGAGTGGTTCTGTGAT
TGTTGACGGTCACAATATAACTCAATTAAAAAATAAACAACTTGCACAATTTCGCAAGACGTCATTAGGCTTTATCTTTC
AAGATTATAGTGTTCTACCAACGTTAACAGTTAAGGAAAATATTATGTTGCCTTTATCTGTTCAACAACATAGTAAGAAG
GAAATGGAGCAACATTATAAAGAGGTTACTGATGCGTTAGGCATTTATGATTTAAGCCAAAAATATCCAAATGAAATATC
TGGTGGTCAACAACAACGTACTGCAGCTGCACGTGCATTCGTACATCAACCTAAAATCATTTTCGCCGATGAACCTACTG
GTGCGCTAGACTCTAAAAGTGCACAAGATTTATTAAATCGTCTTGAAGAAATGAATCGAAAATTTCAATCCACTATCATA
ATGGTCACACATGATCCAGTTGCAGCTAGCTTTGCAAAGCGTGTCATTATGTTAAAAGATGGCAATATTCATTCTGAAAT
TAACCAAGGAGAAGATAGTAAACAAGCCTTTTATGAAAATATCATTCAACTTCAATCTTCTTTAGGTGGTGTGACTCATG
TCATTTAA

Protein sequence : 
MGPSGSGKTTLLNVLSSIDTISSGSVIVDGHNITQLKNKQLAQFRKTSLGFIFQDYSVLPTLTVKENIMLPLSVQQHSKK
EMEQHYKEVTDALGIYDLSQKYPNEISGGQQQRTAAARAFVHQPKIIFADEPTGALDSKSAQDLLNRLEEMNRKFQSTII
MVTHDPVAASFAKRVIMLKDGNIHSEINQGEDSKQAFYENIIQLQSSLGGVTHVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-24 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A284_11600 YP_007386077.1 ABC transporter ATP-binding protein VraD CP001581.1.gene598.p Protein 9e-29 43
A284_11600 YP_007386077.1 ABC transporter ATP-binding protein VraD NC_012469.1.7686878. Protein 3e-30 43
A284_11600 YP_007386077.1 ABC transporter ATP-binding protein VraD CP001581.1.gene798.p Protein 4e-28 42
A284_11600 YP_007386077.1 ABC transporter ATP-binding protein VraD NC_008702.1.4606598. Protein 1e-22 41