Gene Information

Name : A284_11360 (A284_11360)
Accession : YP_007386029.1
Strain : Staphylococcus warneri SG1
Genome accession: NC_020164
Putative virulence/resistance : Unknown
Product : Integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2404386 - 2405603 bp
Length : 1218 bp
Strand : +
Note : COG0582 Integrase

DNA sequence :
ATGTGGCATGAGAAATTCACAAATAAACATGGCAATGTACAATATCGCTATTATGAGAAGTACAAAGACCCTCTCACAAA
CAAATGGCGACGTGTAAGCGTGGTACTTAATAAGAATGGTAAACAGTCACAAAAGGAGGCTCAGAAACGCTTAAATGAGC
GTATAGAGGCTAAGCTAAATGACAAGACACCTACTACACTTAAGTCACTAACTTTCCATGCTGCATGTGATGAGTGGTTA
GAGTACTATAAAAATCATTCTGGTTCAAAGGCTACAACCATTAAAGAAAAAGTAAGTAATACAAACACAGTTAAAAATTC
TATTGATAAAGAAGTGCTGATAAACAACATCACACATACATACCTACAAGATATTATTAATGAGTGGGCTAAATTACATA
GTAAAGGTCATGTTCAATCACTAGTTATCATTATTCGTTCTGTGTTCAAATATGCGTTTAAATACTATGATCTACAAGAT
ATAAGTGTACTAGATAAAATTGATATCCCTAAAAAAGCTAAAACTAGGGATGAGCTACAAGCTAAACGTAATAACTATTT
AGAGGATAGCGAAGTTAAAGAATTACTGGAGTGTTTTGATTATCTAATTAAGCATAAAAACCATTCATCTCGTAAACGTA
ACTACAATATGGTTAAAGCTATAGTACAGTTTCAAATTGCCAATGGCATGCGTATCGGCGAGCTACTTGCTATTAAATCA
GACAATATAAACTATGAAGATAAAACTCTAGATATCGACGGTACAATTAATTGGGTAACTGATAAAGAAACGGGAGCATT
TGGAGTAAAAGAGACCACTAAAACAAGTAAAAGCTATAGAACCATCGGAATCACTACCCAAAGTATTAACTTACTTAAAA
CGCTTATTTTAGAAAACAAGAAAGAAAACCAGTGGAATGACAATTTTATTGATAGAGGGTACATATTCACAAATACAGCT
GGTAGCCCTATCGACTTGAACAAAATAAACACCATTATCAAAGAGGCTACTGAGATTAGTTCCATTAAGAAGTCTGTAAC
GACGCACACATTACGTCACACGCATATATCCACACTTGCGCAATTAGGGATTAACCTAAAAGCTATACAAGAGCGTGTAG
GACACTCGGACTATAAAACCACCTTAGAGATATACACACATGTTACTGATCAGATGGCAAAAGATATGATGAATAAATTA
GAGAAAGTAGGTATATAA

Protein sequence :
MWHEKFTNKHGNVQYRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQKRLNERIEAKLNDKTPTTLKSLTFHAACDEWL
EYYKNHSGSKATTIKEKVSNTNTVKNSIDKEVLINNITHTYLQDIINEWAKLHSKGHVQSLVIIIRSVFKYAFKYYDLQD
ISVLDKIDIPKKAKTRDELQAKRNNYLEDSEVKELLECFDYLIKHKNHSSRKRNYNMVKAIVQFQIANGMRIGELLAIKS
DNINYEDKTLDIDGTINWVTDKETGAFGVKETTKTSKSYRTIGITTQSINLLKTLILENKKENQWNDNFIDRGYIFTNTA
GSPIDLNKINTIIKEATEISSIKKSVTTHTLRHTHISTLAQLGINLKAIQERVGHSDYKTTLEIYTHVTDQMAKDMMNKL
EKVGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0366 YP_039823.1 integrase Not tested SaPI4 Protein 3e-149 80
SAAV_0787 YP_003281710.1 pathogenicity island protein, integrase Virulence SaPIAv Protein 2e-107 56
int AAC28969.1 integrase Not tested SaPI1 Protein 2e-105 56
int YP_493499.1 integrase Not tested SaPI5 Protein 2e-105 55
SACOL0885 YP_185756.1 pathogenicity island protein, integrase Not tested vSa1 Protein 5e-106 55
int AAL04148.1 integrase-like protein Not tested SaPI3 Protein 4e-106 55
SAOV_0274 YP_005735791.1 putative prophage integrase Not tested ¥ÕSa1 Protein 2e-84 46
SAUSA300_1438 YP_494135.1 phiSLT ORF401-like protein, integrase Not tested ¥ÕSa2 Protein 3e-78 43
int NP_646259.1 integrase Not tested ¥ÕSa2 Protein 3e-78 43