Gene Information

Name : A284_11320 (A284_11320)
Accession : YP_007386021.1
Strain : Staphylococcus warneri SG1
Genome accession: NC_020164
Putative virulence/resistance : Unknown
Product : pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2398976 - 2400676 bp
Length : 1701 bp
Strand : -
Note : COG5519 Superfamily II helicase and inactivated derivatives

DNA sequence :
ATGGAACTAACTAAAGATGATATTCTTCACGAAATTGAAGAAGTTAAGCAAGAAAAAGATGCTATTCAAGAAGTTATTCC
TAAAGGTTATGAAATTGAACAACATCAAAATGGTGTGGCGCTTTATCAAATTATTCCTAGTAAAAAAGATGGCGAACCAG
ATAAGAAAATATTTATCACTAATACAATTCCCCAAATCACTGAGCGATTCGAAGATATTGAAAGCAATGAAGTGAGTTTT
AATATGCTTTTTTATGATAATCATTTACCAGTGAATTTAGGTGTTAGTGCTGAAGAAATATCTGACAGCCGTCAATTACT
GAAATTAGTTAATCGAAAATTAGATGTAACTTCAACCACGTCAACTAGGTTGATTGATTATATCAATAAGTCTAAACGAT
ATAATCCACCAGTAAATGTTAATGTGGCCACTCGTTTGGGTCATGTTAAAGGGTATTTTATTTATCCCTATCAAGAAGAA
ATGAAAAACAGCAATATAAAGTTGTTTAACAATGATAGAGGTTTTCAAAAGTTAATTGATTCGTTCCAAAGTAAAGGAAC
GCTTGAAAGTTATTCAAAAAACGTATTTAACCATATTAAGAACTTGCCAATGGTTATGGCCATGTTATATGCGTCACTTG
GTTCAGTATTGTTACGTGAATTTGGACTACAGCCTTTCATTGTAGAAATCTCGGGCAGTACCTCAACAGGTAAGACATTC
ACATTAAATTTGGTTTCTAGTGTATGGGGTACAAGTGAACTTATTACTACATGGGGTTCTACGAAGAACAGTATTGAAGC
AATGGCATCATTCTTAAATTCATTTCCAATATTTAAAGATGATACACGTAATACAAATCCCAAGTTTGTTGCTAATGCAA
CTTACAATTTCTCGAGTGGTGAAAGTAAATCAAGAAGTAATATCAATTTAACACTTAACGCTAAAAAAGAATGGCGAAAT
ATAATGCTTTCTACTGGTGAGGCGTCTATTTCTAATATGGCAGACGAGAAAGCTGGTGTATCTGCTCGTGTAGTTACACT
TCAAGATCAACCATATCCAGATAATTTTGATTTCACCACATTAGATAAAGCATTTAGAGAAAACTACGGTACGTTAGGCA
TAGCATTCATTAAGCAATATGAATCTAAACAAGAGACATACAAGAGTGCATTTGATAGTTATCAAAGGTACTTTAATCGA
AAAGGTAGCAATGAAATCATGCAACGTTTAGGGCATGCATTCGCATTACTACAGGTTACTGGCGAAATTCTAAATGATAT
TGAGGGATTTGAACATGATCATTTTAAAATTATTGAACAAGCCTATGACAGTATGATTAGAAATAATAAGACGATTGATA
AACCTAAGCAATTTCTAGAGGAAATACTGCAATATTTAGATGCGAATAGAAATAATATTGCTGGTGATGGTTATAGTTCT
GTCAAAAATGGTGATATAAAAGCAATATATAAACGTGATTATTTATGTATATTAGGTCAAACTGTACACGATAAATTAGG
ACATGAAATACAGACAATTACAGGCCAATGGGATAAAAAAGGCTATTTAATAACTAGTAAAGACAGAATACAAAAAGAAG
TTAGATTTAATTCTCAAAAAAACAGAGGGTATGCCATTAAAAATGAGATTGTAAAAGAATTAGGATTTGATTTTTCTAAT
TCACATAATCCATATAATTAA

Protein sequence :
MELTKDDILHEIEEVKQEKDAIQEVIPKGYEIEQHQNGVALYQIIPSKKDGEPDKKIFITNTIPQITERFEDIESNEVSF
NMLFYDNHLPVNLGVSAEEISDSRQLLKLVNRKLDVTSTTSTRLIDYINKSKRYNPPVNVNVATRLGHVKGYFIYPYQEE
MKNSNIKLFNNDRGFQKLIDSFQSKGTLESYSKNVFNHIKNLPMVMAMLYASLGSVLLREFGLQPFIVEISGSTSTGKTF
TLNLVSSVWGTSELITTWGSTKNSIEAMASFLNSFPIFKDDTRNTNPKFVANATYNFSSGESKSRSNINLTLNAKKEWRN
IMLSTGEASISNMADEKAGVSARVVTLQDQPYPDNFDFTTLDKAFRENYGTLGIAFIKQYESKQETYKSAFDSYQRYFNR
KGSNEIMQRLGHAFALLQVTGEILNDIEGFEHDHFKIIEQAYDSMIRNNKTIDKPKQFLEEILQYLDANRNNIAGDGYSS
VKNGDIKAIYKRDYLCILGQTVHDKLGHEIQTITGQWDKKGYLITSKDRIQKEVRFNSQKNRGYAIKNEIVKELGFDFSN
SHNPYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55244.1 unknown Not tested SaPIbov2 Protein 0.0 91
rep ABJ97298.1 replication initiation protein Not tested SaPI2 Protein 0.0 84
SAB0351 YP_415853.1 pathogenicity island protein Not tested SaPIbov Protein 0.0 84
SAAV_0797 YP_003281720.1 pathogenicity island protein ORF 14/13 Not tested SaPIAv Protein 0.0 84
SAR0375 YP_039832.1 hypothetical protein Not tested SaPI4 Protein 0.0 83
SAV2021 NP_372545.1 hypothetical protein Not tested vSa4 Protein 0.0 82
SA1828 NP_375129.1 hypothetical protein Not tested vSa4 Protein 0.0 82
SAB1904c YP_417363.1 mobile element-associated protein Not tested SaPIbov2 Protein 0.0 82