Gene Information

Name : A284_10725 (A284_10725)
Accession : YP_007385902.1
Strain : Staphylococcus warneri SG1
Genome accession: NC_020164
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP-binding subunit ClpC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2252647 - 2255100 bp
Length : 2454 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGCTATTTGGTAGATTAACTGAACGTGCGCAAAGAGTATTAGCTCATGCACAAGAAGAAGCAATTCGATTGAACCATTC
AAATATTGGAACAGAACATCTTTTATTAGGTCTAATGAAAGAACCTGAAGGTATCGCAGCAAAAGTATTAGAAAGCTTTA
ATATTACAGAGGATAAAGTTATTGAAGAGGTTGAAAAACTTATCGGTCATGGTCAAGCTCCTATGGCAACATTACATTAT
ACACCTAGAGCTAAAAAAGTGATTGAATTATCAATGGACGAAGCACGTAAACTACATCACAATTTTGTAGGAACAGAACA
TATTTTACTTGGCTTAATCCGTGAAAATGAAGGTGTAGCGGCGCGTGTATTTGCTAACCTTGATTTAAATATTACAAAAG
CACGTGCACAAGTAGTTAAAGCATTAGGTAGCCCAGAAATGAGTAATAAAAATGCTCAAGCAAATAAATCTAATAACACA
CCAACATTAGATAGTTTAGCACGTGATTTAACAATTATTGCTAAAGATGGCACATTAGATCCAGTTGTGGGTCGAGACAA
AGAAATTACACGAGTTATAGAAGTATTAAGTCGTCGTACTAAAAATAATCCTGTATTAATTGGTGAGCCAGGTGTAGGTA
AAACAGCTATTGCGGAAGGTTTAGCTCAAGCTATAGTAAATAATGAAGTACCGGAAACACTTAAAAACAAACGTGTCATG
TCACTAGATATGGGTACTGTTGTAGCTGGTACAAAATACCGTGGTGAATTTGAAGAACGATTGAAAAAAGTAATGGAAGA
AATTCATCAAGCTGGCAATGTGATTCTATTTATTGATGAATTGCATACATTAGTAGGTGCAGGTGGTGCAGAAGGTGCAA
TAGATGCTTCAAATATCTTAAAACCAGCATTAGCACGTGGCGAATTACAATGTATTGGTGCAACAACGTTAGACGAATAT
CGTAAAAACATTGAAAAAGATGCTGCGTTAGAGCGTCGTTTCCAACCTATTCAAGTTGATGAGCCTACAGTTGAAGACAC
TGTATCAATTTTAAAAGGACTTCGTGATCGCTATGAAGCGCATCATCGCATCAATATTTCAGATGAAGCTTTAGAAGCGG
CTGCTAAATTAAGCCATCGCTATGTGTCAGATCGATTTTTACCAGACAAAGCAATTGACCTTATCGATGAAGCAAGTTCA
AAAGTAAGATTGAAAAGTCATACAACACCTAATAATTTAAAAGAAATTGAACAACAAATTGAAAAAGTAAAAAATGAAAA
AGATGCAGCTGTCCATGCACAAGAATTTGAAAATGCAGCTAATCTAAGAGATAAACAAACGAAATTAGAAAAACAATATG
AAGAAGCTAAAAATGAATGGAAAAACTCACAAGATGGGGTAAGTACATCATTATCAGAAGAAGATATTGCTGAGGTTATT
GCAGGTTGGACAGGTATCCCATTAACTAGAATTAATGAAACAGAATCAGATCGTTTACTAAATCTTGAAGATACTCTACA
TGATAGAGTTATTGGTCAAAAAGATGCCGTGACATCTATCAGTAAAGCTGTTAGACGTGCAAGAGCAGGCTTAAAAGACC
CTAAACGTCCAATTGGTAGCTTTATATTCTTAGGACCTACAGGTGTGGGTAAAACTGAATTAGCTCGTGCTTTAGCAGAA
TCAATGTTTGGTGAAGATGATGCTATGATTAGAGTTGATATGAGTGAGTTTATGGAAAAACATGCTGTCAGTCGTTTAGT
CGGAGCCCCTCCAGGCTATGTTGGACATGATGATGGCGGTCAATTAACTGAAAAAGTAAGACGTAAACCATATTCAGTTA
TCCTATTTGATGAAATTGAAAAAGCACATCCAGATGTATTTAATATACTTTTACAAGTTTTAGATGATGGTCATTTAACG
GATACCAAAGGACGTCAAGTTGACTTCCGAAATACAGTTATCATTATGACATCAAATGTTGGTGCTCAAGAATTACAAGA
TCAACGTTTCGCTGGTTTTGGTGGTGCAGATGATGGTCAAGACTATGAATCTATACGTAAAACAATGATGAAAGAGCTTA
AAAATGCTTTCCGTCCTGAGTTCTTAAACCGTGTGGATGATATTATTGTATTCCACAAATTATCTAAAGAAGAACTTAAA
GAAATCGTCACTATGATGGTGAATAAATTAACATTGCGTTTATCAGAACAAAATATTAATATCAAAGTTACTGAAAAAGC
CAAAGAAAAAATTGCTGAAGAAGGATATGATCCAGAATATGGTGCAAGACCATTGATTCGTGCAATTCAAAAAACGGTTG
AAGACAATCTAAGTGAATTGATCTTAGACGGAAATCAATTGGAAGGTAAAGAAGTAACAGTAGATCATGACGGTGAAGAG
TTTAAATATGACATTCAAGATAGAAAAGAAGATAAAGCATCTACTGAAGCGTAA

Protein sequence :
MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQAPMATLHY
TPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGSPEMSNKNAQANKSNNT
PTLDSLARDLTIIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKNKRVM
SLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEY
RKNIEKDAALERRFQPIQVDEPTVEDTVSILKGLRDRYEAHHRINISDEALEAAAKLSHRYVSDRFLPDKAIDLIDEASS
KVRLKSHTTPNNLKEIEQQIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNSQDGVSTSLSEEDIAEVI
AGWTGIPLTRINETESDRLLNLEDTLHDRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLT
DTKGRQVDFRNTVIIMTSNVGAQELQDQRFAGFGGADDGQDYESIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKEELK
EIVTMMVNKLTLRLSEQNINIKVTEKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQLEGKEVTVDHDGEE
FKYDIQDRKEDKASTEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A284_10725 YP_007385902.1 ATP-dependent Clp protease, ATP-binding subunit ClpC VFG0079 Protein 0.0 71
A284_10725 YP_007385902.1 ATP-dependent Clp protease, ATP-binding subunit ClpC VFG0080 Protein 2e-162 53