Gene Information

Name : smpB (A284_09395)
Accession : YP_007385638.1
Strain : Staphylococcus warneri SG1
Genome accession: NC_020164
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1973490 - 1973954 bp
Length : 465 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGGCTAAGAAAAAATCACCAGGCACATTAGCTGAAAACCGTAAAGCAAGACATGATTATAATATAGAAGATACGATTGA
AGCGGGGATTGTGTTACAAGGTACAGAAATTAAATCTATACGTAGAGGTAGCGCCAATCTTAAAGATAGCTATGCTCAAG
TAAAACGTGGTGAAATCTATTTAAATAATATGCATATTGCGCCTTATGAAGAAGGTAACCGATTTAACCATGATCCATTG
CGATCACGTAAGTTGCTCCTTCATAAAAGAGAAATTATTAAATTAGGTGACCGCACACGAGAAATTGGGTATTCTATTAT
TCCGCTAAAATTGTACTTAAAGCATGGTCAATGCAAAGTATTATTAGGTATTGCACGCGGTAAGAAAAAATATGACAAAC
GACAAGCTTTAAAAGAAAAAGCAGTCAAACGTGATATGGATCGCGCAGTAAAAGCCCGTTATTAA

Protein sequence :
MAKKKSPGTLAENRKARHDYNIEDTIEAGIVLQGTEIKSIRRGSANLKDSYAQVKRGEIYLNNMHIAPYEEGNRFNHDPL
RSRKLLLHKREIIKLGDRTREIGYSIIPLKLYLKHGQCKVLLGIARGKKKYDKRQALKEKAVKRDMDRAVKARY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 5e-61 94
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-30 49
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 1e-24 44