Gene Information

Name : A284_09240 (A284_09240)
Accession : YP_007385607.1
Strain : Staphylococcus warneri SG1
Genome accession: NC_020164
Putative virulence/resistance : Unknown
Product : IS1272 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1950880 - 1952598 bp
Length : 1719 bp
Strand : +
Note : COG3666 Transposase and inactivated derivatives

DNA sequence :
ATGACTCAACTTACTCTACCAATGGAAACTTCAGTTCTTATCCCCACAAATGATATTTCACGACATGTAAATGATATTGT
TGAAACAATTCCTGACAATGAATTCGACGAATTCAGACATCACCGTGGTGCAACTTCGTACCATCCTAAAATGATGTTAA
AAGTGATTCTATATGCCTACACACAATCTGTATTCTCAGGTCGTAAAATAGAAAAAATGCTTAATGATAGCATCCGAATG
ATGTGGCTATCACAAAATCAAAAACCTTCTTATAAAACAATTAATCGATTTAGAGTAAATCCAAAAGTAGATGCTTTATT
AGAATCTTTATTTATTCAATTTTACAGTCAGTGTGTAAAACAAAATCTTATAGATGATAAAGCTATTTTTATTGATGGTA
CAAAAATTGAAGCAAATGCCAATCGATATACATTTGTATGGAAAAAGAGTATTCAAAACCATGAATCAAAGATGAATGAG
GATTCTAAAGCCCTCTACCATGAATTGGTAACCAATAAAATCATACCGGAAATTAAAAAAGATCATGATAATGAATTAAC
AAAAGAAGAAATAGATTTGATTGGTAGTCACTTAGATAAAGAAATCGAAGATTTAAACCAACATATCAACAATGAAAAAT
GTACTAAAACAAGAAAACAAATACGTCTCAAAAGAACTAAAATCAAAAAATACAAAAAGCAAATCAATGATTATTTTGAG
CGAAAGTATCGATACGAATTTCAAAAATCTATTTTAAAGGATAGAAATAGTTATTCTAAGACAGATCATGATGCGACATT
TATGAGAATGAAAGAAGATCACATGAAAAATGGACAACTTAAGCCAGGGTATAATTTACAAATAGCGACAAATTCCCAAT
TTGTTTTATCTTATAATGTGTATCAAAATCCAACGGATACTAGAACGATGATTCCATTTTTAAATTCAATTCAAGAGACC
TACGGTCATTTACCTGAATATATTGTAGCTGATGCAGGTTATGGTAGTGAATCAAATTATAAGGCAATTATAGATGACTT
TAATCGAACGCCACTCATAACATATGGAATGTTTATAAAAGATAAAACTAAAAAATATAAAAGTGACATCTTTAATACTC
AAAATTGGAACTATGACGAAATTAATGACGAATTCATTTGTCCGAATAATAAACGGCTAGGTTTTAAAAGATATGCCTAT
CGTCATGATAAGTATGGTTATAAGCGAGACTTCAAATTATATGAATGTGATGATTGTTCAGAATGTCCTCTGAAAAATCA
ATGTATGAACTTCAATTCAAAAACAAACAAAAAAATAATGAAGAATTATAACTGGGAATATTTTAAATCCCAAATTAACA
AAAAGCTTTCAGAACCAGAAACAAAAAATATCTACAGTCAAAGAAAAATTGATGTGGAACCTGTTTTTGGATTTATGAAG
GCTATTTTGGGTTTCACTCGGATGTCTGTCCGAGGACTCAATAAAGTCAAAAGAGAACTTGGTTTTGTATTAATGGCACT
TAATATAAGAAAAGTAGTAGCTCAACGAGCTGAAAATAATCAAAAAATTTATAAAAAAGACAATTTCTATATTATTTCAA
TAGAAATTGTCTTTTTTTCACTTATCCAAGAACTTTATGTCAACGTGTCTTTTTTTCATATAATCTCCTTAAGTAATTTT
CCCCATCCTGACGATAACTCTGGTATACTGAATATATAA

Protein sequence :
MTQLTLPMETSVLIPTNDISRHVNDIVETIPDNEFDEFRHHRGATSYHPKMMLKVILYAYTQSVFSGRKIEKMLNDSIRM
MWLSQNQKPSYKTINRFRVNPKVDALLESLFIQFYSQCVKQNLIDDKAIFIDGTKIEANANRYTFVWKKSIQNHESKMNE
DSKALYHELVTNKIIPEIKKDHDNELTKEEIDLIGSHLDKEIEDLNQHINNEKCTKTRKQIRLKRTKIKKYKKQINDYFE
RKYRYEFQKSILKDRNSYSKTDHDATFMRMKEDHMKNGQLKPGYNLQIATNSQFVLSYNVYQNPTDTRTMIPFLNSIQET
YGHLPEYIVADAGYGSESNYKAIIDDFNRTPLITYGMFIKDKTKKYKSDIFNTQNWNYDEINDEFICPNNKRLGFKRYAY
RHDKYGYKRDFKLYECDDCSECPLKNQCMNFNSKTNKKIMKNYNWEYFKSQINKKLSEPETKNIYSQRKIDVEPVFGFMK
AILGFTRMSVRGLNKVKRELGFVLMALNIRKVVAQRAENNQKIYKKDNFYIISIEIVFFSLIQELYVNVSFFHIISLSNF
PHPDDNSGILNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 0.0 99
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 0.0 99
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 0.0 99
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 0.0 99
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 0.0 99
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 0.0 99
SE0076 NP_763631.1 transposase Not tested SCCpbp4 Protein 0.0 91