Gene Information

Name : A284_06560 (A284_06560)
Accession : YP_007385073.1
Strain : Staphylococcus warneri SG1
Genome accession: NC_020164
Putative virulence/resistance : Virulence
Product : response regulator protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1403093 - 1403752 bp
Length : 660 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGACAAACATTTTAATTGTAGAAGATGAAAAGAACTTAGCTCGATTTATTGAACTTGAACTAACTCACGAGAATTATCA
AGTCGATATTGAAAATGATGGTGCTACTGGTCTAGATAAAGCACTGAATAAAACTTATGATCTCATTATTTTAGATCTAA
TGTTACCCAATATAAATGGATTAGAAATATGTCGTCAAATTCGTCAACAACAAACAACACCGATTATCATCATTACCGCT
AAAAGTGATACTTATGATAAAGTTGCAGGTTTAGATTATGGTGCTGATGATTACATTGTTAAACCATTTGATATTGAAGA
ATTACTTGCTCGTATTAGAGCTATACTTCGTCGTCAACCTAAAAAAGATACGATTAATATTAATGGCATTATTATAGATA
AAGAAGCTTTTGAGGTTACAGTAGATGGCACTCAATTAGATTTAACTAAAACTGAATATGACTTATTCTATGTGTTAGCA
GAGAACAAAAATCATGTATTACAACGTGAACAAATATTGAACCATGTATGGGGATATAATACTGAGGTTGAAACGAATGT
CGTAGATGTCTATATCCGATATTTAAGAAATAAACTCAAACCGTTTGGTAAGGATAAAGTAATTGAAACAGTACGTGGCG
TAGGGTACGTGATTCGATGA

Protein sequence : 
MTNILIVEDEKNLARFIELELTHENYQVDIENDGATGLDKALNKTYDLIILDLMLPNINGLEICRQIRQQQTTPIIIITA
KSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRRQPKKDTININGIIIDKEAFEVTVDGTQLDLTKTEYDLFYVLA
ENKNHVLQREQILNHVWGYNTEVETNVVDVYIRYLRNKLKPFGKDKVIETVRGVGYVIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-26 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-25 43
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-18 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A284_06560 YP_007385073.1 response regulator protein AE015929.1.gene1106. Protein 5e-71 88
A284_06560 YP_007385073.1 response regulator protein NC_003923.1003417.p0 Protein 4e-69 85
A284_06560 YP_007385073.1 response regulator protein NC_013450.8614146.p0 Protein 4e-69 85
A284_06560 YP_007385073.1 response regulator protein NC_002951.3238224.p0 Protein 4e-69 85
A284_06560 YP_007385073.1 response regulator protein NC_007793.3914065.p0 Protein 4e-69 85
A284_06560 YP_007385073.1 response regulator protein NC_002758.1121390.p0 Protein 4e-69 85
A284_06560 YP_007385073.1 response regulator protein NC_010079.5776364.p0 Protein 4e-69 85
A284_06560 YP_007385073.1 response regulator protein NC_002952.2859858.p0 Protein 4e-69 85
A284_06560 YP_007385073.1 response regulator protein NC_007622.3794948.p0 Protein 4e-69 85
A284_06560 YP_007385073.1 response regulator protein HE999704.1.gene1528. Protein 2e-43 58
A284_06560 YP_007385073.1 response regulator protein BAC0125 Protein 6e-27 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A284_06560 YP_007385073.1 response regulator protein VFG0596 Protein 3e-26 44
A284_06560 YP_007385073.1 response regulator protein VFG1563 Protein 7e-19 41
A284_06560 YP_007385073.1 response regulator protein VFG1702 Protein 4e-18 41