Gene Information

Name : A284_05335 (A284_05335)
Accession : YP_007384828.1
Strain : Staphylococcus warneri SG1
Genome accession: NC_020164
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1134671 - 1137301 bp
Length : 2631 bp
Strand : +
Note : COG0258 5'-3' exonuclease (including N-terminal domain of PolI)

DNA sequence :
GTGAATAAATTAGTATTAATTGATGGTAATAGTTTAAGTTTTAGAGCATTCTATGCTTTGCCATTACTTTCAAATAAGGC
AGGCATACATACAAATGCAGTATATGGCTTTGCGATGTTACTAGAAAAAATTCTTAAAGAAGAACAACCTAATCACTTTT
TAGTGGCGTTTGATGCAGGTAAAACAACTTTCAGACATTCTAAATATAGTGAATATAAAGGTGGCAGACAAAAGACACCA
CCTGAATTAAGTGAACAATTTCCATATATTCGTCAATTATTAGATGCATATCACATAAAAAGATATGAATTAGAGAATTA
TGAAGCAGATGATATAATTGGTACTTTGAGTAGAGAAGCGGACAAAGCTGGGTTTGAAACTATCATTATTACAGGTGATA
GAGATTTAACGCAACTCGCTACGGATCATGTCACAATTTACTATACTAAAAAAGGTGTAACAGATGTTGATCATTATACA
CCTGAATTTATCGCAGAAAAATATAATGGATTAACACCAAATCAAATTATTGATATGAAAGGGTTAATGGGTGATACTTC
TGATAATATACCAGGTGTAGCTGGCGTAGGTGAAAAAACAGCGATTAAATTACTAAATCAATTCAATACTGTAGAAGGTG
TCTATGACAATATAGAAAGTGTTTCAGGTAAAAAGCTTAAAGAAAAGCTTGAAAATAGTAAAGATGATGCTTTAATGAGT
AAAGATTTAGCTACTATTAATGTTGAAAGTCCAATCGAAGTTAAATTAGAAGATACTAAAATGGATGAGCACTTAGATGA
AACTGAAAAAATTGAGCTCTTTAAAAAATTAGAGTTTAATCAGCTATTAGCAGAAATAGATTCAGTAGAGGCAACACAAG
AACAAAAAGATAAAACTTTTGAAGTTGAGTCGAATTTTGATCACATTAATTTTTCAGATTTAGATGAGGCAACCATTCAT
TTTGAACTAGAAGATAGTAATTATTTAAAAGACAATATATTAAAATTTGGACTTTATACTGGGGAACATCATGTTGTAAT
TAATGCAGATGAGATTAAGCAATTTTCAGATTTAGTCAATTGGTTAGAAAACCCCAATACAGCCAAAACTGTTTATGATG
CTAAGAAAACTTATGTTGTTTCACATAGACTAGATATCGATATTCAAAACATCCAGTTTGATGTGATGTTGTCTAGTTAT
ATCATCGATCCATCAAGAACGATTGACGATGTGAATTCAGTTGTTTCTTTATATGGACAACATTATGTGCAAGATAACGT
GACTATTTATGGTAAGGGTAAAAAGCATCATGTACCAGAAGATGAGATCTTAAATAAGCATGTTGCATCAATAATTGAAG
CGGTAAGTGAATCAAAAGCTGAAATGCAAAAACAGTTGAAAGAATATAACCAAGAATCATTATTAGCAGATTTAGAACTA
CCGTTAGCTGAAATATTAAGTGAGATGGAAGAGATTGGAATCTTTACTGATGTTAAAGATTTACAACAAATGGAGAAAGA
GATACAAGAAAAGCTAGATGTTTTAATTAAAAATATTCACGAAGCTGCCGGTGAAGAATTTAACATCAATTCTCCAAAAC
AACTTGGCGTAGTGTTGTTTGAAACACTAGAATTACCTGTGATTAAAAAAACAAAAACGGGCTATTCTACTGCTGTCGAT
GTATTGGAACAGTTACAAGGCCAACACCCAATTATTGATTATATTCTAGAATATCGCCAATTATCAAAATTACAATCTAC
TTATGTAGAAGGATTACAAAAAGTGATTAGTGATGATCATCGTATTCACACACGTTTTAACCAAACATTAGCGCAAACTG
GTCGCTTATCAAGTGTTGATCCAAATTTACAAAATATACCTATTCGTCTAGAAGAAGGTAGGAAAATTAGAAAAGCATTT
AAGCCTACATCATCTGATAGTGTTATATTAAGTGCCGATTATTCTCAAATTGAATTACGGGTTTTAGCTCATATTACTCA
AGATGAAAGTATGAAAGAAGCATTTATTAATGGGCATGACATTCATACTGCGACTGCAATGAAGGTTTTCGATGTGGAAG
CGGATGAAGTTGATAGTTTAATGCGTAGACAAGCGAAAGCAGTTAACTTTGGAATTGTCTATGGCATTAGTGATTATGGG
TTAAGCCAAAGTTTAGGAATTACACGTAAAAAGGCGAAAGCATTTATTGATGATTATTTAGATAGTTTTCCAGGAGTCAA
ACAGTATATGTCAGATATTGTGAAAGATGCTAAAGCACAAGGTTTTGTAGAAACATTATTACATCGTCGTAGATATATTC
CAGATATTACTAGTCGTAATTTTAATTTAAGAAGTTTTGCAGAAAGAACGGCAATGAATACGCCAATTCAAGGTAGTGCG
GCAGATATTATCAAATTAGCTATGGTGCAATTCAATAAGGAAGTACAACATACTGATTATCACGCGAAACTATTATTACA
AGTTCACGATGAATTAATCTTTGAAGTTCCAAAAGATGAAGTAGCATCGTTTAGTAAGTTTGTAGAAGAAATTATGGAGT
CTGCATTAAAATTAGATGTGCCACTAAAAGTTGACTCAAGTTACGGTGCGACGTGGTATGATGCAAAATAA

Protein sequence :
MNKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAVYGFAMLLEKILKEEQPNHFLVAFDAGKTTFRHSKYSEYKGGRQKTP
PELSEQFPYIRQLLDAYHIKRYELENYEADDIIGTLSREADKAGFETIIITGDRDLTQLATDHVTIYYTKKGVTDVDHYT
PEFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQFNTVEGVYDNIESVSGKKLKEKLENSKDDALMS
KDLATINVESPIEVKLEDTKMDEHLDETEKIELFKKLEFNQLLAEIDSVEATQEQKDKTFEVESNFDHINFSDLDEATIH
FELEDSNYLKDNILKFGLYTGEHHVVINADEIKQFSDLVNWLENPNTAKTVYDAKKTYVVSHRLDIDIQNIQFDVMLSSY
IIDPSRTIDDVNSVVSLYGQHYVQDNVTIYGKGKKHHVPEDEILNKHVASIIEAVSESKAEMQKQLKEYNQESLLADLEL
PLAEILSEMEEIGIFTDVKDLQQMEKEIQEKLDVLIKNIHEAAGEEFNINSPKQLGVVLFETLELPVIKKTKTGYSTAVD
VLEQLQGQHPIIDYILEYRQLSKLQSTYVEGLQKVISDDHRIHTRFNQTLAQTGRLSSVDPNLQNIPIRLEEGRKIRKAF
KPTSSDSVILSADYSQIELRVLAHITQDESMKEAFINGHDIHTATAMKVFDVEADEVDSLMRRQAKAVNFGIVYGISDYG
LSQSLGITRKKAKAFIDDYLDSFPGVKQYMSDIVKDAKAQGFVETLLHRRRYIPDITSRNFNLRSFAERTAMNTPIQGSA
ADIIKLAMVQFNKEVQHTDYHAKLLLQVHDELIFEVPKDEVASFSKFVEEIMESALKLDVPLKVDSSYGATWYDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 48