|
Name : APECO78_04510 (APECO78_04510) Accession : YP_007380083.1 Strain : Escherichia coli APEC O78 Genome accession: NC_020163 Putative virulence/resistance : Unknown Product : Hcp-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 940463 - 940945 bp Length : 483 bp Strand : - Note : COG3157 Hemolysin-coregulated protein (uncharacterized) DNA sequence : ATGGCAAATATAAGTTATTTATCTTTGAGTGGAGAGACACAAGGGCTAATTTCAGCAGGTTGCTCAACGCTTGATTCTGT CGGAAACAAAGCGCAGCCAGAACATAAAGATCAGATCATGGTTTATGCGTTAATGCATTCCATCTCAAGAAGTCAAAATG TCAATCATCATGAATTAATTATCACCAAACCGGTTGATAAATCCTCACCATTGCTGGCAAAAGCACTTAGTGACAATGAA AAAATGGCAATATGTGAATTTATACTCTACCGAACCAGTAAAGCGGGTATTTACCAGCCTTATTATAAAATAAATCTGTC AAAAGCCCGAATATCAAGTATTGATTTTGTCACACCGCATGCTGTCCTGGAAAAAGAACTAGAACCACAGGAGAGAATTG CCTTTATTTATGAAGATATTTCCTGGGAGCATACGTTAGCCGGTACGAATGCAATGAGTAAATGGCAGGATCGTGTACAG TAA Protein sequence : MANISYLSLSGETQGLISAGCSTLDSVGNKAQPEHKDQIMVYALMHSISRSQNVNHHELIITKPVDKSSPLLAKALSDNE KMAICEFILYRTSKAGIYQPYYKINLSKARISSIDFVTPHAVLEKELEPQERIAFIYEDISWEHTLAGTNAMSKWQDRVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec32 | AAQ96726.1 | Aec32 | Not tested | AGI-1 | Protein | 6e-44 | 56 |
| aec32 | YP_851413.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 8e-44 | 56 |
| orf23 | AAO17189.1 | Orf23 | Not tested | tcd island | Protein | 9e-31 | 47 |
