Name : APECO78_04100 (APECO78_04100) Accession : YP_007380001.1 Strain : Escherichia coli APEC O78 Genome accession: NC_020163 Putative virulence/resistance : Unknown Product : putative transposase Function : - COG functional category : - COG ID : - EC number : - Position : 848547 - 849449 bp Length : 903 bp Strand : + Note : - DNA sequence : ATGGATGCACCGAGTACCACACCGCATGACGCGGTATTTAAACAATTTTTAATGCATGCGGAGACGGCTCGCGACTTTCT GGAGATACATTTGCCAGTGGAATTACGCGAACTTTGTGACCTCAACACGCTTCATTTAGAGTCGGGGAGTTTCATTGAAG AGAGCCTGAAAGGACACAGCACGGACGTGCTCTATTCCGTGCAAATGCAGGGCAATCCCGGTTATCTGCATGTTGTGATT GAACACCAAAGCAAGCCGGATAAGAAAATGGCCTTTCGCATGATGCGTTATTCTATTGCTGCCATGCACCGGCATCTGGA GGCGGATCACGATAAGCTGCCGCTGGTGGTGCCGATACTGTTTTATCAGGGCGAGGCCACACCTTATCCGCTCTCAATGT GCTGGTTTGATATATTTTACTCGCCGGAGCTGGCACGACGCGTCTATAACAGTCCTTTCCCGCTGGTGGATATCACCATC ACACCGGATGACGAAATCATGCAACATCGGCGGATTGCGATTCTCGAACTACTGCAAAAACATATTCGCCAGCGCGACTT AATGTTATTGCTGGAGCAACTGGTCACGCTGATTGACGAAGGGTACACTAGCGGAAGTCAGTTAGTTGCCATGCAAAACT ATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTATGGTGTGCTGAGAGACAGGGAAACGGGAGGGGAGTCT ATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCAGCAGGGAAGACAGGAGGAAAGGCAAGA ATTCGCCCTGCGTCTTCTAAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTG ATAAGGTAATTAACCTTATTTAA Protein sequence : MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVI EHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITI TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGES MMTLAQWFEEKGIEKGIQQGRQEERQEFALRLLSKGMSREDVAEMANLPLAEIDKVINLI |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
YpsIP31758_3726 | YP_001402680.1 | transposase | Not tested | YAPI | Protein | 9e-71 | 61 |
pilW | CAF28495.1 | putative transposase | Not tested | YAPI | Protein | 7e-71 | 61 |
YE3497 | YP_001007658.1 | putative transposase | Not tested | YAPI | Protein | 4e-69 | 60 |
tnp | AAN64216.1 | transposase | Not tested | necrotizing factor locus | Protein | 4e-68 | 55 |
PMI2627 | YP_002152329.1 | transposase | Not tested | Not named | Protein | 8e-52 | 48 |