Gene Information

Name : APECO78_03295 (APECO78_03295)
Accession : YP_007379842.1
Strain : Escherichia coli APEC O78
Genome accession: NC_020163
Putative virulence/resistance : Unknown
Product : putative pinE invertase/site-specific DNA recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 667905 - 668261 bp
Length : 357 bp
Strand : +
Note : COG1961 Site-specific recombinases, DNA invertase Pin homologs

DNA sequence :
ATGCTTATTGGCTATGTACGTGTGTCAACAAATGACCAGAACACAGATCTACAGCGTAATGCGCTGAACTGTGCAGGATG
CGAGCTGATTTTTGAAGACAAGATAAGCGGTACAAAGTCTGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGG
AAGGTGACACTCTGGTTGTCTGGAAGCTGGATCGGCTGGGGCGTAGTATGCGGCATCTGGTCATTCTGGTTGAGGAGTTG
CGCGAACGTGGCGTTAATTTTCGCAGCCTGACGGATGCTATTGATATCAGCACGTCGATGGGGCGTTTTTTCTTTTATGT
GATGGGGGCCTTGGCTGAAATTGAGTTTCAGGATTAA

Protein sequence :
MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSEGDTLVVWKLDRLGRSMRHLVILVEEL
RERGVNFRSLTDAIDISTSMGRFFFYVMGALAEIEFQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
resX ADZ05759.1 invertase/resolvase Not tested AbaR10 Protein 7e-26 58
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 8e-26 58
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 8e-26 58
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 8e-26 58
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 8e-26 58
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 1e-25 58
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 1e-25 58
tnpRN YP_001800927.1 resolvase of Tn5393-like transposon, N-terminal fragment Not tested Not named Protein 6e-17 55
EXA29 ABD94638.1 Tn1721 resolvase Not tested ExoU island A Protein 4e-11 47