Gene Information

Name : APECO78_02905 (APECO78_02905)
Accession : YP_007379764.1
Strain : Escherichia coli APEC O78
Genome accession: NC_020163
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate delta-isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 606288 - 606668 bp
Length : 381 bp
Strand : -
Note : COG3232 5-carboxymethyl-2-hydroxymuconate isomerase

DNA sequence :
ATGCCGCACTTTATCGTGGAATGTACTGAAAATATTCGTGAAGAAGCCCGCTTACCTGAGCTGTTTGCCAGTGTTAACAC
TGCACTGGCGGCAACGGGGATTTTTCCGCTTGGGGGAATACGTAGCCGGGCGCACTGGATCGATACCTGGCAAATGGCTG
ATGGCAAGCACGATTACGCCTTTGTGCATATGACGCTAAAAATCGGCAGCGGGCGCAGCCTGGAAAGCCGTCAGGAAGTG
GGCGAAATGCTGTTTGATCTGATTAAAACGCACTTCGCCTCACTGATGGAGAGCCGTTACCTGGCGCTTTCATTTGAGAT
TGCAGAGCTGCACCCGACGCTGAATTTTAAACAAAACAACGTGCACGCGTTGTTTAAATAA

Protein sequence :
MPHFIVECTENIREEARLPELFASVNTALAATGIFPLGGIRSRAHWIDTWQMADGKHDYAFVHMTLKIGSGRSLESRQEV
GEMLFDLIKTHFASLMESRYLALSFEIAELHPTLNFKQNNVHALFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaF AAO17181.1 HpaF Not tested tcd island Protein 2e-47 81