Gene Information

Name : APECO78_02495 (APECO78_02495)
Accession : YP_007379682.1
Strain : Escherichia coli APEC O78
Genome accession: NC_020163
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 522958 - 523527 bp
Length : 570 bp
Strand : -
Note : -

DNA sequence : 
ATGACCTACAAATACAACCCCTTCTGGCAGCAACGTATTCGTGAGACGGTGCGGCACGCACTGAATGTTCATCCCCGCCT
GACGGCATTGCGGGTTGACCTGCGTTTCCCGGATGTACCGGCAGCAACGGACGCAGCTGTGATATCCCGCTTCATCAATG
CCCTGAAAGCCCGAATCGACGCTTACCAGAAACGTAAGCATCGGGAAGGTAAACGCGTGCATCCCACAACCCTGCATTAC
GTCTGGGCCCGGGAGTTTGGGGAGTGCAAAGGTAAAAAACACTATCACCTGATGCTGCTGGTTAACCGGGATACCTGGTG
TCGTGCCGGTGATTACCGTGCTCCGGGATCACTGGCCGGGATGATTAAACAGGCGTGGTGCAGTGCCCTGGGAGTGGATG
TCGGGTGCCATGCCACGCTGGTGCATTTTCCGGCCTGGCCGGCGGTGTGGCTGGAACGCGATGATGACACTGGCTTTCAG
CAGGTGCTGGAACGTGCTGACTATCTGGCGAAGGAACATACCAAAGCTCACTGCACCGGTGAGCGCAATTTTGGCTGTAG
CCGGAGTTGA

Protein sequence : 
MTYKYNPFWQQRIRETVRHALNVHPRLTALRVDLRFPDVPAATDAAVISRFINALKARIDAYQKRKHREGKRVHPTTLHY
VWAREFGECKGKKHYHLMLLVNRDTWCRAGDYRAPGSLAGMIKQAWCSALGVDVGCHATLVHFPAWPAVWLERDDDTGFQ
QVLERADYLAKEHTKAHCTGERNFGCSRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1084 YP_853104.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-87 100
unnamed AAL08464.2 unknown Not tested SRL Protein 4e-86 98
unnamed ADD91714.1 hypothetical protein Not tested PAI-I AL862 Protein 8e-83 95
ECO103_3573 YP_003223434.1 hypothetical protein Not tested LEE Protein 5e-82 95
unnamed AAW51744.1 Aec61 Not tested AGI-3 Protein 2e-82 95
unnamed CAI43834.1 hypothetical protein Not tested LEE Protein 2e-80 93
unnamed CAD42091.1 hypothetical protein Not tested PAI II 536 Protein 4e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO78_02495 YP_007379682.1 hypothetical protein VFG1055 Protein 2e-86 98
APECO78_02495 YP_007379682.1 hypothetical protein VFG1610 Protein 2e-35 41