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Name : APECO78_02470 (APECO78_02470) Accession : YP_007379677.1 Strain : Escherichia coli APEC O78 Genome accession: NC_020163 Putative virulence/resistance : Unknown Product : putative transposase Function : - COG functional category : - COG ID : - EC number : - Position : 519361 - 520746 bp Length : 1386 bp Strand : - Note : COG3436 Transposase and inactivated derivatives DNA sequence : ATGAACGACATCTCTTCTGACGACATCTTCCTGCTAAAACAGCGCCTGGCCGAACAGGAAGCGCTGATCCACGCCCTGCA GGAAAAGCTGAGCAACCGGGAGCGCGAAATAGACCATCTGCAGGCGCAGCTGGATAAACTCCGCCGGATGAACTTCGGCA GTCGTTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGATCTGAACCGGCTTCAGAAAGAGAGCGATACGCTG ACTGGTAGGGTGTATGACCCGGCAGTACAGCGTCCGTTGCGTCAGACCCGCACCCGTAAGCCGTTCCCTGAATCACTACC CCGTGACGAAAAGCGACTGTTGCCTGCGGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTATCTGGGCGAGGATA CCGCCGAACAGCTGGAGTTGATGCGTAGCGCCTTCCGGGTTATCCGGACGGTACGGGAAAAACATGCCTGTACTCAGTGC GATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGCTGGCCCGCGTGCT GACCTCGAAGTATGCAGAGCACACCCCGCTGTATTGCCAGTCAGAAATATACGGCCGGCAAGGTGTGGAGCTGAGCCGTT CACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTGCTGTCTCCGCTGGAAGAGGCGCTTCATGGCTATGTCATGACT GACGGCAAACTCCATGCCGATGATACCCCGGTCCAGGTACTGCTGCCGGGTAATAAGAAGACGAAGACCGGGCGGTTGTG GGCGTATGTTCGTGATGACCGCAATGCCGGGTCAGCGTTGGCACCTGCAGTGTGGTTCGCTTACAGCCCGGACAGAAAAG GCATCCATCCGCAGACTCATCTTGCTTGCTTCAGCGGTGTGCTGCAAGCGGATGCGTACGCCGGGTTCAACGAGCTGTAT CGCAATGGTGGGATAACGGAAGCTGCCTGCTGGGCTCATGCCCGCCGAAAGATCCACGATGTGCACGTCCGCATCCCGTC AGCACTGACGGAAGAAGCCCTAGAGCAGATCGGTCAGTTGTACGCCATAGAGGCGGATATAAGGGGAATGCCGGCAGAGC AGCGGCTTGCTGAACGTCAGCGAAAAACGAAACCGCTGTTGAAATCCCTGGAAAGCTGGTTGCGTGAAAAGATGAAGACC CTGTTCTTCGGCTCTGGCCATGGTGGTGAGCGGGGAGCGCTACTGTACAGCCTGATCGGGACGTGCAAACTGAATGACGT GGATCCAGAAAGCTACCTTCGCCATGTGCCTGGCGTCATAGCAGACTGGCCGGTCAACCGGGTCAGCGAACTGCTTCCGT GGCGCATAGCACTGCCAGCTGAATAA Protein sequence : MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTL TGRVYDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQC DAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYCQSEIYGRQGVELSRSLLSGWVDACCRLLSPLEEALHGYVMT DGKLHADDTPVQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTHLACFSGVLQADAYAGFNELY RNGGITEAACWAHARRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT LFFGSGHGGERGALLYSLIGTCKLNDVDPESYLRHVPGVIADWPVNRVSELLPWRIALPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08460.1 | unknown | Not tested | SRL | Protein | 0.0 | 99 |
| l0015 | CAD33775.1 | L0015 protein | Not tested | PAI I 536 | Protein | 5e-162 | 99 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 2e-163 | 99 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 0.0 | 97 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 0.0 | 97 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 0.0 | 97 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 0.0 | 97 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 0.0 | 97 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 0.0 | 97 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 0.0 | 97 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 0.0 | 97 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 0.0 | 97 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 0.0 | 95 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 0.0 | 95 |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 9e-122 | 75 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 2e-108 | 63 |
| s0025 | CAD33772.1 | IS66-like transposase | Not tested | PAI I 536 | Protein | 1e-89 | 61 |
| tnp | AEA34687.1 | IS66 family transposase | Not tested | Not named | Protein | 5e-101 | 59 |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 3e-101 | 58 |
| Z4317 | NP_289543.1 | hypothetical protein | Not tested | OI-122 | Protein | 2e-99 | 54 |
| ECO103_3554 | YP_003223421.1 | hypothetical protein | Not tested | LEE | Protein | 1e-99 | 54 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 4e-101 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| APECO78_02470 | YP_007379677.1 | putative transposase | VFG1051 | Protein | 0.0 | 99 |
| APECO78_02470 | YP_007379677.1 | putative transposase | VFG1516 | Protein | 3e-162 | 99 |
| APECO78_02470 | YP_007379677.1 | putative transposase | VFG0793 | Protein | 0.0 | 97 |
| APECO78_02470 | YP_007379677.1 | putative transposase | VFG1700 | Protein | 4e-122 | 75 |
| APECO78_02470 | YP_007379677.1 | putative transposase | VFG1736 | Protein | 1e-111 | 64 |
| APECO78_02470 | YP_007379677.1 | putative transposase | VFG1513 | Protein | 7e-90 | 61 |
