Name : APECO78_02395 (APECO78_02395) Accession : YP_007379662.1 Strain : Escherichia coli APEC O78 Genome accession: NC_020163 Putative virulence/resistance : Virulence Product : iron-dicitrate transporter ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 506086 - 506892 bp Length : 807 bp Strand : - Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components DNA sequence : ATGACTTTACGAACTGAAAATCTGACGGTCAGTTACGGGACAGACAAGGTACTTAACGACGTTTCACTCTCACTGCCAAC GGGGAAGATCACCGCCCTGATCGGTCCTAACGGTTGCGGGAAATCGACGCTGTTAAACTGTTTTTCGCGGCTTTTAATGC CGCAGTCTGGCACCGTATTTCTCGGCGATAATCCCATAAATATGCTCTCATCGCGCCAGTTGGCCCGCAGGCTTTCGCTG CTGCCTCAGCACCATTTAACGCCAGAGGGGATCACAGTCCAGGAGCTGGTTTCGTATGGTCGTAATCCCTGGCTGTCACT CTGGGGGCGTCTCTCCGCTGAAGACAATGCACGAGTTAATGTCGCCATGAACCAGACCCGGATCAATCATCTTGCCGTTC GTCGGTTAACCGAGCTTTCCGGCGGTCAGCGCCAGCGCGCATTTCTGGCAATGGTCCTGGCCCAGAATACGCCCGTTGTA TTACTTGATGAGCCAACCACCTATCTTGATATCAATCACCAGGTGGACCTGATGCGGTTGATGGGCGAACTCCGGACTCA GGGGAAAACGGTGGTCGCTGTGCTGCACGACCTTAATCAGGCTAGCCGGTACTGCGATCAACTGGTGGTAATGGCAAACG GACATGTTATGGCGCAAGGCACACCAGGAAGAGGTGATGACCCCAGGATTGCTGAGAACAGTATTCAGCGTGGAAGCGGA AATACACCCCGAGCCGGTATCTGGCAGGCCGATGTGCCTAATGAGGTAGATTGCACAGGCCGTAAGAACCAAACCACGAC TGAATGA Protein sequence : MTLRTENLTVSYGTDKVLNDVSLSLPTGKITALIGPNGCGKSTLLNCFSRLLMPQSGTVFLGDNPINMLSSRQLARRLSL LPQHHLTPEGITVQELVSYGRNPWLSLWGRLSAEDNARVNVAMNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVV LLDEPTTYLDINHQVDLMRLMGELRTQGKTVVAVLHDLNQASRYCDQLVVMANGHVMAQGTPGRGDDPRIAENSIQRGSG NTPRAGIWQADVPNEVDCTGRKNQTTTE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
fecE | AAL08451.1 | ATP-binding protein FecE | Virulence | SRL | Protein | 7e-95 | 100 |
fagC | YP_005682397.1 | ATP binding cytoplasmic membrane protein | Virulence | PiCp 1 | Protein | 1e-47 | 53 |
fagC | YP_005684488.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 1e-47 | 53 |
fagC | YP_005680307.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 1e-47 | 53 |
fagC | YP_003782430.1 | ABC transporter ATP-binding protein | Not tested | PiCp 1 | Protein | 1e-47 | 53 |
iusE | YP_005143742.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 6e-41 | 49 |
DIP0585 | NP_938961.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 6e-40 | 47 |
phuC | YP_005686351.1 | Iron(III) dicitrate transport permease-like protein yusV | Virulence | PiCp 7 | Protein | 5e-26 | 43 |
phuC | YP_005682167.1 | Iron(III) dicitrate transport permease-like protein yusV | Virulence | PiCp 7 | Protein | 3e-26 | 43 |
phuC | YP_005684259.1 | Iron(III) dicitrate transport permease-like protein yusV | Virulence | PiCp 7 | Protein | 3e-26 | 43 |
cpfrc_01918 | YP_003784318.1 | hypothetical protein | Not tested | PiCp 7 | Protein | 3e-26 | 43 |
SPN23F_09560 | YP_002510939.1 | ferric siderophore ABC transporter ATP-binding protein | Virulence | PPI-1 | Protein | 4e-37 | 42 |
SP_1035 | NP_345510.1 | iron-compound ABC transporter ATP-binding protein | Not tested | PPI-1 | Protein | 4e-37 | 42 |
ciuD | YP_003783391.1 | iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 1e-40 | 42 |
ciuD | YP_005685432.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 1e-40 | 42 |
ciuD | YP_005681255.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 1e-40 | 42 |
ciuD | YP_005683346.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 1e-40 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
APECO78_02395 | YP_007379662.1 | iron-dicitrate transporter ATP-binding subunit | BAC0164 | Protein | 4e-95 | 100 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
APECO78_02395 | YP_007379662.1 | iron-dicitrate transporter ATP-binding subunit | VFG1042 | Protein | 4e-95 | 100 |
APECO78_02395 | YP_007379662.1 | iron-dicitrate transporter ATP-binding subunit | VFG0925 | Protein | 7e-43 | 53 |