Gene Information

Name : APECO78_02380 (APECO78_02380)
Accession : YP_007379659.1
Strain : Escherichia coli APEC O78
Genome accession: NC_020163
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 504575 - 504988 bp
Length : 414 bp
Strand : +
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
ATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACG
TGGTGGTCATGAACATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCG
GTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTG
GGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCC
CGTCGGGGTGATGTTCCAAGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGAT
CAGGCAGAGTATGA

Protein sequence :
MGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPV
GWAMSFSPDSRLTMKALEMAWETRGKPVGVMFQAIKAVIIRAGSSGSYCGDTGSGRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42035.1 hypothetical protein Not tested PAI II 536 Protein 3e-42 79
l0006 CAD33765.1 L0006 protein Not tested PAI I 536 Protein 3e-31 59
unnamed AAK01527.1 transposase B Not tested PAGI-1 Protein 2e-24 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO78_02380 YP_007379659.1 transposase VFG1554 Protein 1e-42 79
APECO78_02380 YP_007379659.1 transposase VFG1506 Protein 1e-31 59