Gene Information

Name : APECO78_02325 (APECO78_02325)
Accession : YP_007379648.1
Strain : Escherichia coli APEC O78
Genome accession: NC_020163
Putative virulence/resistance : Virulence
Product : putative sulfatase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 496540 - 497655 bp
Length : 1116 bp
Strand : -
Note : COG2194 Predicted membrane-associated, metal-dependent hydrolase

DNA sequence :
GTGAACCGCCCCGTGTTTCCTGTTTATCATTTTCTGGTCAGTGCCGCGATTCTGGTATTCGTGGTGATTTTCTGGCGGAC
ACACCATCGCGACCACCGTAACTGGCTGGCTCTACGGCTATTCGTATTATGCTCTGTAAACCGTTGGCCATTGCGGATGG
TTAAAGGAACAGTTGTGGGGACAACTGACACATTACGTGAAATGCAGCGTTATGAACAACTGAGTCAGCACGGGGCTGAC
AACTGGAAAATCCAGCCGGGAGCACCGTTATATGATACGATTGTTATTGTCACTGGTGAGAGTGTGCGCAGGGATTATAT
GTCAGTGTATGGCTATCCCGTACCAACCACACCGTGGCTGAATACGGCACCCGGTTTATTTATTGACGATTATACCTCGA
CAGCCTCCAGTACAGTGTCTTCCCTGAGCCGGACACTGATTTATGACTATGAGCAGAACCCTGATTCCGGCAACAATGTG
GTGGCGCTGGCAGCAAAAGCAGGATACAGCACATGGTGGATATCCAATCAAGGAAAACTGGGGGAGCATGACACACGCAT
CTCTGTTATTGCTTCTGATGCGGAGCATGCCACTTTCCTCAAGAAAGGCAGCTTCGCTTCCCGTAAAACAGATGACAAAC
TGTTGTTACAGGAAACAGAACGTGCGCTGGCGGATACATCCTCTCCGAAGATAATTTTCCTGCACATGATGGGTTCTCAT
CCAAATCCGTGTGACAGCCTTAACTCCTGGCCGAATAATTACCTGGAGCAGTATCCCCGAAAAATTGCCTGTTACCTCGC
CAGCATCAGTAAACTGGATAACTTTCTTGGCCAGCTTGATGGTATCCTTCGCCGGTACTCACGTCATTTCGCCATGCTTT
ACTTTTCTGGCCTTGGGCTGTCGGTCAGCGACAGTGCCAATCCTGTTCATCATTATGGTCATGTGCAGGGAGGCTACAGT
GTGCCACTGATTATTACCGCCAGTGACATAACGTCTCATCAGCCCGTCAGTAGAAAAATCAGTGCCCGTCATTTCGCAGG
TATTTTTCAGTGGATGACCGGTATTTGTACTGAAAATATACCGCCATTCAATCCGCTGACAGACGAAGATAATTAA

Protein sequence :
MNRPVFPVYHFLVSAAILVFVVIFWRTHHRDHRNWLALRLFVLCSVNRWPLRMVKGTVVGTTDTLREMQRYEQLSQHGAD
NWKIQPGAPLYDTIVIVTGESVRRDYMSVYGYPVPTTPWLNTAPGLFIDDYTSTASSTVSSLSRTLIYDYEQNPDSGNNV
VALAAKAGYSTWWISNQGKLGEHDTRISVIASDAEHATFLKKGSFASRKTDDKLLLQETERALADTSSPKIIFLHMMGSH
PNPCDSLNSWPNNYLEQYPRKIACYLASISKLDNFLGQLDGILRRYSRHFAMLYFSGLGLSVSDSANPVHHYGHVQGGYS
VPLIITASDITSHQPVSRKISARHFAGIFQWMTGICTENIPPFNPLTDEDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AFX83957.1 sulfatase family protein Not tested SE-PAI Protein 1e-153 93
yjgX CAD42019.1 hypothetical protein Not tested PAI II 536 Protein 1e-154 92
c3559 NP_755434.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-119 92
APECO1_3531 YP_854244.1 hypothetical protein Not tested PAI I APEC-O1 Protein 7e-154 92
ORF_3 AAZ04414.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-154 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO78_02325 YP_007379648.1 putative sulfatase VFG1538 Protein 8e-155 92
APECO78_02325 YP_007379648.1 putative sulfatase VFG1696 Protein 5e-120 92