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Name : lpfA (APECO78_22530) Accession : YP_007383667.1 Strain : Escherichia coli APEC O78 Genome accession: NC_020163 Putative virulence/resistance : Unknown Product : fimbrial protein Function : - COG functional category : - COG ID : - EC number : - Position : 4675927 - 4676499 bp Length : 573 bp Strand : - Note : COG3539 P pilus assembly protein, pilin FimA DNA sequence : ATGAAGCGTAATATTATAGGCGGTGCATTCACTCTGGCATCTCTAATGCTGGCCGGGCATGCACTGGCAGAAGATGGTGT TGTTCACTTCGTCGGTGAAATTGTCGACACTACTTGTGAAGTTACCTCCGATACAGCCGATCAAATTGTCCCACTGGGTA AAGTCAGTAAAAATGCATTTTCAGGTGTAGGTAGTCTGGCGTCGCCACAGAAGTTCAGTATTAAACTTGAAAATTGCCCG GCAACGTACACTCAAGCAGCCGTTCGTTTTGATGGTACAGAAGCGCCTGGCGGCGACGGCGACCTGAAAGTGGGTACGCC GCTTACAGCAGGCAACCCTGGTGATTTTACCGGTACAGGACAAGCGATTGCGGCAACCGGCGTTGGTATTCGTATTTTTA ACCAGTCCGATAATTCGCAGGTTAAACTTTATAACGACTCTGCTTATACCGCTATCGATGCTGAAGGCAAGGCTGAAATG AAGTTTATTGCACGCTATGTGGCAACCAATGCGACCGTAACGGCTGGTACGGCGAACGCTGATTCACAATTTACTGTCGA ATATAAGAAATAA Protein sequence : MKRNIIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCP ATYTQAAVRFDGTEAPGGDGDLKVGTPLTAGNPGDFTGTGQAIAATGVGIRIFNQSDNSQVKLYNDSAYTAIDAEGKAEM KFIARYVATNATVTAGTANADSQFTVEYKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lpfA | YP_006098367.1 | putative major fimbrial subunit | Not tested | Tn2411 | Protein | 1e-76 | 99 |
